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A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo
In this study, we present a scheme for the reconstruction of cellular morphology and the inference of mechanical forces in the early C. elegans embryo. We have developed and bench-marked a morphological reconstruction scheme that transforms flourescence-based in vivo images of membranes into a point...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038995/ https://www.ncbi.nlm.nih.gov/pubmed/29990323 http://dx.doi.org/10.1371/journal.pone.0199151 |
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author | Xu, Muzhi Wu, Yicong Shroff, Hari Wu, Min Mani, Madhav |
author_facet | Xu, Muzhi Wu, Yicong Shroff, Hari Wu, Min Mani, Madhav |
author_sort | Xu, Muzhi |
collection | PubMed |
description | In this study, we present a scheme for the reconstruction of cellular morphology and the inference of mechanical forces in the early C. elegans embryo. We have developed and bench-marked a morphological reconstruction scheme that transforms flourescence-based in vivo images of membranes into a point cloud of smoothed surface patches, which facilitates an accurate estimation of membrane curvatures and the angles between membranes. Assuming an isotropic and homogeneous distribution of tensions along individual membranes, we infer a pattern of forces that are 7% deviated from force balance at edges, and 10% deviated from the Young-Laplace relation across membranes. We demonstrate the stability of our inference scheme via a sensitivity analysis, and the reproducibility of our image-analysis and force inference pipelines. |
format | Online Article Text |
id | pubmed-6038995 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-60389952018-07-19 A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo Xu, Muzhi Wu, Yicong Shroff, Hari Wu, Min Mani, Madhav PLoS One Research Article In this study, we present a scheme for the reconstruction of cellular morphology and the inference of mechanical forces in the early C. elegans embryo. We have developed and bench-marked a morphological reconstruction scheme that transforms flourescence-based in vivo images of membranes into a point cloud of smoothed surface patches, which facilitates an accurate estimation of membrane curvatures and the angles between membranes. Assuming an isotropic and homogeneous distribution of tensions along individual membranes, we infer a pattern of forces that are 7% deviated from force balance at edges, and 10% deviated from the Young-Laplace relation across membranes. We demonstrate the stability of our inference scheme via a sensitivity analysis, and the reproducibility of our image-analysis and force inference pipelines. Public Library of Science 2018-07-10 /pmc/articles/PMC6038995/ /pubmed/29990323 http://dx.doi.org/10.1371/journal.pone.0199151 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article Xu, Muzhi Wu, Yicong Shroff, Hari Wu, Min Mani, Madhav A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo |
title | A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo |
title_full | A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo |
title_fullStr | A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo |
title_full_unstemmed | A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo |
title_short | A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo |
title_sort | scheme for 3-dimensional morphological reconstruction and force inference in the early c. elegans embryo |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038995/ https://www.ncbi.nlm.nih.gov/pubmed/29990323 http://dx.doi.org/10.1371/journal.pone.0199151 |
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