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A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo

In this study, we present a scheme for the reconstruction of cellular morphology and the inference of mechanical forces in the early C. elegans embryo. We have developed and bench-marked a morphological reconstruction scheme that transforms flourescence-based in vivo images of membranes into a point...

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Detalles Bibliográficos
Autores principales: Xu, Muzhi, Wu, Yicong, Shroff, Hari, Wu, Min, Mani, Madhav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038995/
https://www.ncbi.nlm.nih.gov/pubmed/29990323
http://dx.doi.org/10.1371/journal.pone.0199151
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author Xu, Muzhi
Wu, Yicong
Shroff, Hari
Wu, Min
Mani, Madhav
author_facet Xu, Muzhi
Wu, Yicong
Shroff, Hari
Wu, Min
Mani, Madhav
author_sort Xu, Muzhi
collection PubMed
description In this study, we present a scheme for the reconstruction of cellular morphology and the inference of mechanical forces in the early C. elegans embryo. We have developed and bench-marked a morphological reconstruction scheme that transforms flourescence-based in vivo images of membranes into a point cloud of smoothed surface patches, which facilitates an accurate estimation of membrane curvatures and the angles between membranes. Assuming an isotropic and homogeneous distribution of tensions along individual membranes, we infer a pattern of forces that are 7% deviated from force balance at edges, and 10% deviated from the Young-Laplace relation across membranes. We demonstrate the stability of our inference scheme via a sensitivity analysis, and the reproducibility of our image-analysis and force inference pipelines.
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spelling pubmed-60389952018-07-19 A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo Xu, Muzhi Wu, Yicong Shroff, Hari Wu, Min Mani, Madhav PLoS One Research Article In this study, we present a scheme for the reconstruction of cellular morphology and the inference of mechanical forces in the early C. elegans embryo. We have developed and bench-marked a morphological reconstruction scheme that transforms flourescence-based in vivo images of membranes into a point cloud of smoothed surface patches, which facilitates an accurate estimation of membrane curvatures and the angles between membranes. Assuming an isotropic and homogeneous distribution of tensions along individual membranes, we infer a pattern of forces that are 7% deviated from force balance at edges, and 10% deviated from the Young-Laplace relation across membranes. We demonstrate the stability of our inference scheme via a sensitivity analysis, and the reproducibility of our image-analysis and force inference pipelines. Public Library of Science 2018-07-10 /pmc/articles/PMC6038995/ /pubmed/29990323 http://dx.doi.org/10.1371/journal.pone.0199151 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Xu, Muzhi
Wu, Yicong
Shroff, Hari
Wu, Min
Mani, Madhav
A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo
title A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo
title_full A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo
title_fullStr A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo
title_full_unstemmed A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo
title_short A scheme for 3-dimensional morphological reconstruction and force inference in the early C. elegans embryo
title_sort scheme for 3-dimensional morphological reconstruction and force inference in the early c. elegans embryo
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038995/
https://www.ncbi.nlm.nih.gov/pubmed/29990323
http://dx.doi.org/10.1371/journal.pone.0199151
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