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Study of diatom assemblages in Sundarbans mangrove water based on light microscopy and rbcL gene sequencing

Sundarbans, the world's largest mangrove deltaic region, is one of the most productive ecosystems in tropical and subtropical latitudes and also serve as a nursery ground for rich coastal fisheries. In this study, we highlighted diatom assemblages from the Indian part of Sundarbans Biosphere Re...

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Autores principales: Samanta, Brajogopal, Bhadury, Punyasloke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6039704/
https://www.ncbi.nlm.nih.gov/pubmed/30003158
http://dx.doi.org/10.1016/j.heliyon.2018.e00663
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author Samanta, Brajogopal
Bhadury, Punyasloke
author_facet Samanta, Brajogopal
Bhadury, Punyasloke
author_sort Samanta, Brajogopal
collection PubMed
description Sundarbans, the world's largest mangrove deltaic region, is one of the most productive ecosystems in tropical and subtropical latitudes and also serve as a nursery ground for rich coastal fisheries. In this study, we highlighted diatom assemblages from the Indian part of Sundarbans Biosphere Reserve (SBR) area for the first time based on light microscopy and rbcL gene sequencing and phylogeny. In total, 15 diatom species (11 centric forms and 4 pennate forms) were documented using light microscopy, and 3 major clades of diatoms were detected in rbcL phylogeny. Out of 15 diatom species, 7 were the first record from Sundarbans mangrove water. One of the species, Thalassiosira ferelineata Hasle and Fryxell, was reported for the first time in an Asian mangrove ecosystem based on light microscopy. Our study suggests the importance of establishing cultures and their polyphasic taxonomy are the future necessity to create an authenticated diatom database from mangrove water, which is still overlooked globally.
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spelling pubmed-60397042018-07-12 Study of diatom assemblages in Sundarbans mangrove water based on light microscopy and rbcL gene sequencing Samanta, Brajogopal Bhadury, Punyasloke Heliyon Article Sundarbans, the world's largest mangrove deltaic region, is one of the most productive ecosystems in tropical and subtropical latitudes and also serve as a nursery ground for rich coastal fisheries. In this study, we highlighted diatom assemblages from the Indian part of Sundarbans Biosphere Reserve (SBR) area for the first time based on light microscopy and rbcL gene sequencing and phylogeny. In total, 15 diatom species (11 centric forms and 4 pennate forms) were documented using light microscopy, and 3 major clades of diatoms were detected in rbcL phylogeny. Out of 15 diatom species, 7 were the first record from Sundarbans mangrove water. One of the species, Thalassiosira ferelineata Hasle and Fryxell, was reported for the first time in an Asian mangrove ecosystem based on light microscopy. Our study suggests the importance of establishing cultures and their polyphasic taxonomy are the future necessity to create an authenticated diatom database from mangrove water, which is still overlooked globally. Elsevier 2018-06-27 /pmc/articles/PMC6039704/ /pubmed/30003158 http://dx.doi.org/10.1016/j.heliyon.2018.e00663 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Samanta, Brajogopal
Bhadury, Punyasloke
Study of diatom assemblages in Sundarbans mangrove water based on light microscopy and rbcL gene sequencing
title Study of diatom assemblages in Sundarbans mangrove water based on light microscopy and rbcL gene sequencing
title_full Study of diatom assemblages in Sundarbans mangrove water based on light microscopy and rbcL gene sequencing
title_fullStr Study of diatom assemblages in Sundarbans mangrove water based on light microscopy and rbcL gene sequencing
title_full_unstemmed Study of diatom assemblages in Sundarbans mangrove water based on light microscopy and rbcL gene sequencing
title_short Study of diatom assemblages in Sundarbans mangrove water based on light microscopy and rbcL gene sequencing
title_sort study of diatom assemblages in sundarbans mangrove water based on light microscopy and rbcl gene sequencing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6039704/
https://www.ncbi.nlm.nih.gov/pubmed/30003158
http://dx.doi.org/10.1016/j.heliyon.2018.e00663
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