Cargando…

IRWNRLPI: Integrating Random Walk and Neighborhood Regularized Logistic Matrix Factorization for lncRNA-Protein Interaction Prediction

Long non-coding RNA (lncRNA) plays an important role in many important biological processes and has attracted widespread attention. Although the precise functions and mechanisms for most lncRNAs are still unknown, we are certain that lncRNAs usually perform their functions by interacting with the co...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhao, Qi, Zhang, Yue, Hu, Huan, Ren, Guofei, Zhang, Wen, Liu, Hongsheng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2018
Materias:	Genetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6040094/ https://www.ncbi.nlm.nih.gov/pubmed/30023002 http://dx.doi.org/10.3389/fgene.2018.00239

Ejemplares similares

LPI-NRLMF: lncRNA-protein interaction prediction by neighborhood regularized logistic matrix factorization
por: Liu, Hongsheng, et al.
Publicado: (2017)

Identifying and Exploiting Potential miRNA-Disease Associations With Neighborhood Regularized Logistic Matrix Factorization
por: He, Bin-Sheng, et al.
Publicado: (2018)

Screening potential lncRNA biomarkers for breast cancer and colorectal cancer combining random walk and logistic matrix factorization
por: Li, Shijun, et al.
Publicado: (2023)

Predicting lncRNA–Protein Interaction With Weighted Graph-Regularized Matrix Factorization
por: Sun, Xibo, et al.
Publicado: (2021)

Projection-Based Neighborhood Non-Negative Matrix Factorization for lncRNA-Protein Interaction Prediction
por: Ma, Yingjun, et al.
Publicado: (2019)

Neighborhood Regularized Logistic Matrix Factorization for Drug-Target Interaction Prediction
por: Liu, Yong, et al.
Publicado: (2016)

Detecting lncRNA–Cancer Associations by Combining miRNAs, Genes, and Prognosis With Matrix Factorization
por: Yan, Huan, et al.
Publicado: (2021)

DSPLMF: A Method for Cancer Drug Sensitivity Prediction Using a Novel Regularization Approach in Logistic Matrix Factorization
por: Emdadi, Akram, et al.
Publicado: (2020)

Multiple Partial Regularized Nonnegative Matrix Factorization for Predicting Ontological Functions of lncRNAs
por: Zhao, Jianbang, et al.
Publicado: (2019)

Predicting LncRNA–Disease Association by a Random Walk With Restart on Multiplex and Heterogeneous Networks
por: Yao, Yuhua, et al.
Publicado: (2021)

Finding Lung-Cancer-Related lncRNAs Based on Laplacian Regularized Least Squares With Unbalanced Bi-Random Walk
por: Guo, Zhifeng, et al.
Publicado: (2022)

Identifying lncRNA–disease association based on GAT multiple-operator aggregation and inductive matrix completion
por: Zhang, Yi, et al.
Publicado: (2022)

Integrated Dissection of lncRNA-miRNA-mRNA Pairs and Potential Regulatory Role of lncRNA PCAT19 in Lung Adenocarcinoma
por: Tang, Xiaomei, et al.
Publicado: (2022)

Inferring Latent Disease-lncRNA Associations by Faster Matrix Completion on a Heterogeneous Network
por: Li, Wen, et al.
Publicado: (2019)

Integrated Analysis of lncRNA-miRNA-mRNA ceRNA Network Identified lncRNA EPB41L4A-AS1 as a Potential Biomarker in Non-small Cell Lung Cancer
por: Wang, Meiqi, et al.
Publicado: (2020)

iLncDA-RSN: identification of lncRNA-disease associations based on reliable similarity networks
por: Li, Yahan, et al.
Publicado: (2023)

Prediction of lncRNA–Disease Associations via Closest Node Weight Graphs of the Spatial Neighborhood Based on the Edge Attention Graph Convolutional Network
por: Li, Jianwei, et al.
Publicado: (2022)

DNILMF-LDA: Prediction of lncRNA-Disease Associations by Dual-Network Integrated Logistic Matrix Factorization and Bayesian Optimization
por: Li, Yan, et al.
Publicado: (2019)

Identification of a 5-lncRNA-Based Signature for Immune Characteristics and Prognosis of Lung Squamous Cell Carcinoma and Verification of the Function of lncRNA SPATA41
por: Huan, Sheng, et al.
Publicado: (2022)

NRLMFβ: Beta-distribution-rescored neighborhood regularized logistic matrix factorization for improving the performance of drug–target interaction prediction
por: Ban, Tomohiro, et al.
Publicado: (2019)

Survival-Related lncRNA Landscape Analysis Identifies LINC01614 as an Oncogenic lncRNA in Gastric Cancer
por: Wu, Huijie, et al.
Publicado: (2021)

Identification of lncRNA biomarkers in hepatocellular carcinoma by comprehensive analysis of the lncRNA-mediated ceRNA network
por: Ye, Dingde, et al.
Publicado: (2022)

SPCMLMI: A structural perturbation-based matrix completion method to predict lncRNA–miRNA interactions
por: Wang, Mei-Neng, et al.
Publicado: (2022)

Shared and Cell-Type-Specific Gene Expression Patterns Associated With Autism Revealed by Integrative Regularized Non-Negative Matrix Factorization
por: Guan, Jinting, et al.
Publicado: (2022)

Identification of Key lncRNA–mRNA Pairs and Functional lncRNAs in Breast Cancer by Integrative Analysis of TCGA Data
por: Li, Zhe, et al.
Publicado: (2021)

A cuproptosis-related LncRNA signature: Integrated analysis associated with biochemical recurrence and immune landscape in prostate cancer
por: Ren, Lei, et al.
Publicado: (2023)

Integrative Analysis of lncRNA-mRNA Profile Reveals Potential Predictors for SAPHO Syndrome
por: Sun, Yuxiu, et al.
Publicado: (2021)

RNMFMDA: A Microbe-Disease Association Identification Method Based on Reliable Negative Sample Selection and Logistic Matrix Factorization With Neighborhood Regularization
por: Peng, Lihong, et al.
Publicado: (2020)

Development of an Immune-Related LncRNA Prognostic Signature for Glioma
por: Cao, Yudong, et al.
Publicado: (2021)

LncRRIsearch: A Web Server for lncRNA-RNA Interaction Prediction Integrated With Tissue-Specific Expression and Subcellular Localization Data
por: Fukunaga, Tsukasa, et al.
Publicado: (2019)

A Novel Necroptosis-Related lncRNA Signature Predicts the Prognosis of Lung Adenocarcinoma
por: Lu, Yinliang, et al.
Publicado: (2022)

An integrative analysis of an lncRNA–mRNA competing endogenous RNA network to identify functional lncRNAs in uterine leiomyomas with RNA sequencing
por: Meng, Fanfei, et al.
Publicado: (2023)

Prediction of Recurrence in Cervical Cancer Using a Nine-lncRNA Signature
por: Mao, Yu, et al.
Publicado: (2019)

A Six-lncRNA Signature for Immunophenotype Prediction of Glioblastoma Multiforme
por: Gao, Ming, et al.
Publicado: (2021)

Identification of LncRNA Prognostic Markers for Ovarian Cancer by Integration of Co-expression and CeRNA Network
por: Liang, Huisheng, et al.
Publicado: (2021)

Analysis of lncRNA Expression in Patients With Eosinophilic and Neutrophilic Asthma Focusing on LNC_000127
por: Zhu, Yujin, et al.
Publicado: (2019)

Integrated Analysis of Angiogenesis Related lncRNA-miRNA-mRNA in Patients With Coronary Chronic Total Occlusion Disease
por: Gao, Wei, et al.
Publicado: (2022)

SNPs in lncRNA Regions and Breast Cancer Risk
por: Suvanto, Maija, et al.
Publicado: (2020)

Interaction Between LncRNA and UPF1 in Tumors
por: He, Junjian, et al.
Publicado: (2021)

Construction of lncRNA prognostic model related to cuproptosis in esophageal carcinoma
por: Zhang, Liming, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_q1abhdmc45pqpgjqghi0lc88i9