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Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its Members

Freeze-thaw (FT) events can influence soil functions. However, the overall impact of FTs on soil bacterial communities, especially in temperate regions, remains unclear. In this study, soil samples were collected from a midtemperate region in the northeast of China, and three incubation tests were t...

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Detalles Bibliográficos
Autores principales: Juan, Yinghua, Jiang, Nan, Tian, Lulu, Chen, Xiaodong, Sun, Wentao, Chen, Lijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6040300/
https://www.ncbi.nlm.nih.gov/pubmed/30050943
http://dx.doi.org/10.1155/2018/8412429
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author Juan, Yinghua
Jiang, Nan
Tian, Lulu
Chen, Xiaodong
Sun, Wentao
Chen, Lijun
author_facet Juan, Yinghua
Jiang, Nan
Tian, Lulu
Chen, Xiaodong
Sun, Wentao
Chen, Lijun
author_sort Juan, Yinghua
collection PubMed
description Freeze-thaw (FT) events can influence soil functions. However, the overall impact of FTs on soil bacterial communities, especially in temperate regions, remains unclear. In this study, soil samples were collected from a midtemperate region in the northeast of China, and three incubation tests were then designed with varied FT amplitudes (i.e., at a freezing temperature of −15, −9, and −3°C, respectively), frequencies of FT cycles (i.e., under one, six, and 15 FT cycles, respectively) and soil water content (SWC) values (i.e., at 10 and 30% SWC, respectively). High-throughput sequencing of 16S rRNA gene amplicons was performed and the functional profile was further predicted based on these data, in addition to examinations of bulk microbial properties. Data analyses suggested that, first of all, the FT amplitude significantly influenced the bulk microbial properties and bacterial community (composition and function); certain taxa showed a nonlinear response to the three amplitudes. Next, compared to a single FTC, multiple FT cycles had only minor effects on the bacterial functional capabilities, although the bulk microbial properties changed significantly after multiple FT cycles. In addition, the bacterial response to FTs was influenced by the SWC, characterized by the significantly different bacterial community structures (composition and function) and the opposite trends of enzyme activities. Finally, RDA plots and a correlation network assembled data from all soil samples across the three tests and suggested that bacterial response trajectories changed because some species were influenced mainly by other species (i.e., biotic environment) during FT processes.
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spelling pubmed-60403002018-07-26 Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its Members Juan, Yinghua Jiang, Nan Tian, Lulu Chen, Xiaodong Sun, Wentao Chen, Lijun Biomed Res Int Research Article Freeze-thaw (FT) events can influence soil functions. However, the overall impact of FTs on soil bacterial communities, especially in temperate regions, remains unclear. In this study, soil samples were collected from a midtemperate region in the northeast of China, and three incubation tests were then designed with varied FT amplitudes (i.e., at a freezing temperature of −15, −9, and −3°C, respectively), frequencies of FT cycles (i.e., under one, six, and 15 FT cycles, respectively) and soil water content (SWC) values (i.e., at 10 and 30% SWC, respectively). High-throughput sequencing of 16S rRNA gene amplicons was performed and the functional profile was further predicted based on these data, in addition to examinations of bulk microbial properties. Data analyses suggested that, first of all, the FT amplitude significantly influenced the bulk microbial properties and bacterial community (composition and function); certain taxa showed a nonlinear response to the three amplitudes. Next, compared to a single FTC, multiple FT cycles had only minor effects on the bacterial functional capabilities, although the bulk microbial properties changed significantly after multiple FT cycles. In addition, the bacterial response to FTs was influenced by the SWC, characterized by the significantly different bacterial community structures (composition and function) and the opposite trends of enzyme activities. Finally, RDA plots and a correlation network assembled data from all soil samples across the three tests and suggested that bacterial response trajectories changed because some species were influenced mainly by other species (i.e., biotic environment) during FT processes. Hindawi 2018-06-27 /pmc/articles/PMC6040300/ /pubmed/30050943 http://dx.doi.org/10.1155/2018/8412429 Text en Copyright © 2018 Yinghua Juan et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Juan, Yinghua
Jiang, Nan
Tian, Lulu
Chen, Xiaodong
Sun, Wentao
Chen, Lijun
Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its Members
title Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its Members
title_full Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its Members
title_fullStr Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its Members
title_full_unstemmed Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its Members
title_short Effect of Freeze-Thaw on a Midtemperate Soil Bacterial Community and the Correlation Network of Its Members
title_sort effect of freeze-thaw on a midtemperate soil bacterial community and the correlation network of its members
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6040300/
https://www.ncbi.nlm.nih.gov/pubmed/30050943
http://dx.doi.org/10.1155/2018/8412429
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