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Comparative genomic analysis of eutherian adiponectin genes

The present study proposed updated and standardized classification and nomenclature of eutherian adiponectin genes implicated in regulation of systemic metabolism and inflammation and activation of classical complement pathway. The revisions of comprehensive adiponectin gene data sets used eutherian...

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Detalles Bibliográficos
Autor principal: Premzl, Marko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6040601/
https://www.ncbi.nlm.nih.gov/pubmed/30003153
http://dx.doi.org/10.1016/j.heliyon.2018.e00647
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author Premzl, Marko
author_facet Premzl, Marko
author_sort Premzl, Marko
collection PubMed
description The present study proposed updated and standardized classification and nomenclature of eutherian adiponectin genes implicated in regulation of systemic metabolism and inflammation and activation of classical complement pathway. The revisions of comprehensive adiponectin gene data sets used eutherian comparative genomic analysis protocol and public reference genomic sequence assemblies. Among 438 potential coding sequences, the tests of reliability of eutherian public genomic sequences annotated most comprehensive curated third-party data gene data set of eutherian adiponectin genes that included 211 complete coding sequences. There were 18 major gene clusters of eutherian adiponectin genes described, one of which included evidence of differential gene expansions. For example, the present analysis initially described human ADIF2 and ADIR genes. Finally, the tests of protein molecular evolution using relative synonymous codon usage statistics confirmed protein primary structure similarities between eutherian adiponectins and tumor necrosis factor ligands.
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spelling pubmed-60406012018-07-12 Comparative genomic analysis of eutherian adiponectin genes Premzl, Marko Heliyon Article The present study proposed updated and standardized classification and nomenclature of eutherian adiponectin genes implicated in regulation of systemic metabolism and inflammation and activation of classical complement pathway. The revisions of comprehensive adiponectin gene data sets used eutherian comparative genomic analysis protocol and public reference genomic sequence assemblies. Among 438 potential coding sequences, the tests of reliability of eutherian public genomic sequences annotated most comprehensive curated third-party data gene data set of eutherian adiponectin genes that included 211 complete coding sequences. There were 18 major gene clusters of eutherian adiponectin genes described, one of which included evidence of differential gene expansions. For example, the present analysis initially described human ADIF2 and ADIR genes. Finally, the tests of protein molecular evolution using relative synonymous codon usage statistics confirmed protein primary structure similarities between eutherian adiponectins and tumor necrosis factor ligands. Elsevier 2018-06-06 /pmc/articles/PMC6040601/ /pubmed/30003153 http://dx.doi.org/10.1016/j.heliyon.2018.e00647 Text en © 2018 The Author http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Premzl, Marko
Comparative genomic analysis of eutherian adiponectin genes
title Comparative genomic analysis of eutherian adiponectin genes
title_full Comparative genomic analysis of eutherian adiponectin genes
title_fullStr Comparative genomic analysis of eutherian adiponectin genes
title_full_unstemmed Comparative genomic analysis of eutherian adiponectin genes
title_short Comparative genomic analysis of eutherian adiponectin genes
title_sort comparative genomic analysis of eutherian adiponectin genes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6040601/
https://www.ncbi.nlm.nih.gov/pubmed/30003153
http://dx.doi.org/10.1016/j.heliyon.2018.e00647
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