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Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system

The aim of this study was to develop a multiplex PCR test to detect Achromobacter xylosoxidans (AX), Burkholderia cepacia (BC), Pseudomonas aeruginosa (PSA) and Stenotrophomonas maltophilia (SM) directly from CF patient's respiratory samples using the open mode of the BD MAX™ System. A total of...

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Autores principales: Rocchetti, Talita T., Silbert, Suzane, Gostnell, Alicia, Kubasek, Carly, Jerris, Robert, Vong, Jennifer, Widen, Raymond
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6041425/
https://www.ncbi.nlm.nih.gov/pubmed/30009245
http://dx.doi.org/10.1016/j.plabm.2018.e00102
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author Rocchetti, Talita T.
Silbert, Suzane
Gostnell, Alicia
Kubasek, Carly
Jerris, Robert
Vong, Jennifer
Widen, Raymond
author_facet Rocchetti, Talita T.
Silbert, Suzane
Gostnell, Alicia
Kubasek, Carly
Jerris, Robert
Vong, Jennifer
Widen, Raymond
author_sort Rocchetti, Talita T.
collection PubMed
description The aim of this study was to develop a multiplex PCR test to detect Achromobacter xylosoxidans (AX), Burkholderia cepacia (BC), Pseudomonas aeruginosa (PSA) and Stenotrophomonas maltophilia (SM) directly from CF patient's respiratory samples using the open mode of the BD MAX™ System. A total of 402 CF respiratory samples were evaluated by culture and PCR. Specific sets of primers and probes for each target were designed in-house. Out of 402 samples tested, 196 were identified as negative and 206 as positive by culture for AX, PSA, BC and SM. Among culture positive samples, PCR detected 21/27 AX, 4/5 BC, 138/140 PSA and 29/34 SM. In addition, PCR assay identified 35 samples as positive that were initially negative by culture for those 4 targets. The CF BDM test proved to be an excellent tool to detect AX, BC, PSA and SM by real-time PCR on an automated platform.
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spelling pubmed-60414252018-07-13 Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system Rocchetti, Talita T. Silbert, Suzane Gostnell, Alicia Kubasek, Carly Jerris, Robert Vong, Jennifer Widen, Raymond Pract Lab Med Article The aim of this study was to develop a multiplex PCR test to detect Achromobacter xylosoxidans (AX), Burkholderia cepacia (BC), Pseudomonas aeruginosa (PSA) and Stenotrophomonas maltophilia (SM) directly from CF patient's respiratory samples using the open mode of the BD MAX™ System. A total of 402 CF respiratory samples were evaluated by culture and PCR. Specific sets of primers and probes for each target were designed in-house. Out of 402 samples tested, 196 were identified as negative and 206 as positive by culture for AX, PSA, BC and SM. Among culture positive samples, PCR detected 21/27 AX, 4/5 BC, 138/140 PSA and 29/34 SM. In addition, PCR assay identified 35 samples as positive that were initially negative by culture for those 4 targets. The CF BDM test proved to be an excellent tool to detect AX, BC, PSA and SM by real-time PCR on an automated platform. Elsevier 2018-05-24 /pmc/articles/PMC6041425/ /pubmed/30009245 http://dx.doi.org/10.1016/j.plabm.2018.e00102 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Rocchetti, Talita T.
Silbert, Suzane
Gostnell, Alicia
Kubasek, Carly
Jerris, Robert
Vong, Jennifer
Widen, Raymond
Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system
title Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system
title_full Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system
title_fullStr Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system
title_full_unstemmed Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system
title_short Rapid detection of four non-fermenting Gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the BD MAX™ system
title_sort rapid detection of four non-fermenting gram-negative bacteria directly from cystic fibrosis patient's respiratory samples on the bd max™ system
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6041425/
https://www.ncbi.nlm.nih.gov/pubmed/30009245
http://dx.doi.org/10.1016/j.plabm.2018.e00102
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