Cargando…
Soft document clustering using a novel graph covering approach
BACKGROUND: In text mining, document clustering describes the efforts to assign unstructured documents to clusters, which in turn usually refer to topics. Clustering is widely used in science for data retrieval and organisation. RESULTS: In this paper we present and discuss a novel graph-theoretical...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6047369/ https://www.ncbi.nlm.nih.gov/pubmed/30026812 http://dx.doi.org/10.1186/s13040-018-0172-x |
_version_ | 1783339939106127872 |
---|---|
author | Dörpinghaus, Jens Schaaf, Sebastian Jacobs, Marc |
author_facet | Dörpinghaus, Jens Schaaf, Sebastian Jacobs, Marc |
author_sort | Dörpinghaus, Jens |
collection | PubMed |
description | BACKGROUND: In text mining, document clustering describes the efforts to assign unstructured documents to clusters, which in turn usually refer to topics. Clustering is widely used in science for data retrieval and organisation. RESULTS: In this paper we present and discuss a novel graph-theoretical approach for document clustering and its application on a real-world data set. We will show that the well-known graph partition to stable sets or cliques can be generalized to pseudostable sets or pseudocliques. This allows to perform a soft clustering as well as a hard clustering. The software is freely available on GitHub. CONCLUSIONS: The presented integer linear programming as well as the greedy approach for this [Formula: see text] -complete problem lead to valuable results on random instances and some real-world data for different similarity measures. We could show that PS-Document Clustering is a remarkable approach to document clustering and opens the complete toolbox of graph theory to this field. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13040-018-0172-x) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6047369 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-60473692018-07-19 Soft document clustering using a novel graph covering approach Dörpinghaus, Jens Schaaf, Sebastian Jacobs, Marc BioData Min Methodology BACKGROUND: In text mining, document clustering describes the efforts to assign unstructured documents to clusters, which in turn usually refer to topics. Clustering is widely used in science for data retrieval and organisation. RESULTS: In this paper we present and discuss a novel graph-theoretical approach for document clustering and its application on a real-world data set. We will show that the well-known graph partition to stable sets or cliques can be generalized to pseudostable sets or pseudocliques. This allows to perform a soft clustering as well as a hard clustering. The software is freely available on GitHub. CONCLUSIONS: The presented integer linear programming as well as the greedy approach for this [Formula: see text] -complete problem lead to valuable results on random instances and some real-world data for different similarity measures. We could show that PS-Document Clustering is a remarkable approach to document clustering and opens the complete toolbox of graph theory to this field. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13040-018-0172-x) contains supplementary material, which is available to authorized users. BioMed Central 2018-06-14 /pmc/articles/PMC6047369/ /pubmed/30026812 http://dx.doi.org/10.1186/s13040-018-0172-x Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Methodology Dörpinghaus, Jens Schaaf, Sebastian Jacobs, Marc Soft document clustering using a novel graph covering approach |
title | Soft document clustering using a novel graph covering approach |
title_full | Soft document clustering using a novel graph covering approach |
title_fullStr | Soft document clustering using a novel graph covering approach |
title_full_unstemmed | Soft document clustering using a novel graph covering approach |
title_short | Soft document clustering using a novel graph covering approach |
title_sort | soft document clustering using a novel graph covering approach |
topic | Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6047369/ https://www.ncbi.nlm.nih.gov/pubmed/30026812 http://dx.doi.org/10.1186/s13040-018-0172-x |
work_keys_str_mv | AT dorpinghausjens softdocumentclusteringusinganovelgraphcoveringapproach AT schaafsebastian softdocumentclusteringusinganovelgraphcoveringapproach AT jacobsmarc softdocumentclusteringusinganovelgraphcoveringapproach |