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IMA Genome-F 9: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata
Draft genomes of the species Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina and Morchella septimelata are present...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures
2018
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6048567/ https://www.ncbi.nlm.nih.gov/pubmed/30018880 http://dx.doi.org/10.5598/imafungus.2018.09.01.13 |
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| author | Wingfield, Brenda D. Bills, Gerald F. Dong, Yang Huang, Wenli Nel, Wilma J. Swalarsk-Parry, Benedicta S. Vaghefi, Niloofar Wilken, P. Markus An, Zhiqiang de Beer, Z. Wilhelm De Vos, Lieschen Chen, Li Duong, Tuan A. Gao, Yun Hammerbacher, Almuth Kikkert, Julie R. Li, Yan Li, Huiying Li, Kuan Li, Qiang Liu, Xingzhong Ma, Xiao Naidoo, Kershney Pethybridge, Sarah J. Sun, Jingzu Steenkamp, Emma T. van der Nest, Magriet A. van Wyk, Stephanie Wingfield, Michael J. Xiong, Chuan Yue, Qun Zhang, Xiaoling |
| author_facet | Wingfield, Brenda D. Bills, Gerald F. Dong, Yang Huang, Wenli Nel, Wilma J. Swalarsk-Parry, Benedicta S. Vaghefi, Niloofar Wilken, P. Markus An, Zhiqiang de Beer, Z. Wilhelm De Vos, Lieschen Chen, Li Duong, Tuan A. Gao, Yun Hammerbacher, Almuth Kikkert, Julie R. Li, Yan Li, Huiying Li, Kuan Li, Qiang Liu, Xingzhong Ma, Xiao Naidoo, Kershney Pethybridge, Sarah J. Sun, Jingzu Steenkamp, Emma T. van der Nest, Magriet A. van Wyk, Stephanie Wingfield, Michael J. Xiong, Chuan Yue, Qun Zhang, Xiaoling |
| author_sort | Wingfield, Brenda D. |
| collection | PubMed |
| description | Draft genomes of the species Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina and Morchella septimelata are presented. Both mating types (MAT1-1 and MAT1-2) of Cercospora beticola are included. Two strains of Coleophoma cylindrospora that produce sulfated homotyrosine echinocandin variants, FR209602, FR220897 and FR220899 are presented. The sequencing of Aspergillus mulundensis, Coleophoma cylindrospora and Phialophora cf. hyalina has enabled mapping of the gene clusters encoding the chemical diversity from the echinocandin pathways, providing data that reveals the complexity of secondary metabolism in these different species. Overall these genomes provide a valuable resource for understanding the molecular processes underlying pathogenicity (in some cases), biology and toxin production of these economically important fungi. |
| format | Online Article Text |
| id | pubmed-6048567 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2018 |
| publisher | Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-60485672018-07-17 IMA Genome-F 9: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata Wingfield, Brenda D. Bills, Gerald F. Dong, Yang Huang, Wenli Nel, Wilma J. Swalarsk-Parry, Benedicta S. Vaghefi, Niloofar Wilken, P. Markus An, Zhiqiang de Beer, Z. Wilhelm De Vos, Lieschen Chen, Li Duong, Tuan A. Gao, Yun Hammerbacher, Almuth Kikkert, Julie R. Li, Yan Li, Huiying Li, Kuan Li, Qiang Liu, Xingzhong Ma, Xiao Naidoo, Kershney Pethybridge, Sarah J. Sun, Jingzu Steenkamp, Emma T. van der Nest, Magriet A. van Wyk, Stephanie Wingfield, Michael J. Xiong, Chuan Yue, Qun Zhang, Xiaoling IMA Fungus Article Draft genomes of the species Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina and Morchella septimelata are presented. Both mating types (MAT1-1 and MAT1-2) of Cercospora beticola are included. Two strains of Coleophoma cylindrospora that produce sulfated homotyrosine echinocandin variants, FR209602, FR220897 and FR220899 are presented. The sequencing of Aspergillus mulundensis, Coleophoma cylindrospora and Phialophora cf. hyalina has enabled mapping of the gene clusters encoding the chemical diversity from the echinocandin pathways, providing data that reveals the complexity of secondary metabolism in these different species. Overall these genomes provide a valuable resource for understanding the molecular processes underlying pathogenicity (in some cases), biology and toxin production of these economically important fungi. Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures 2018-06-11 2018-06 /pmc/articles/PMC6048567/ /pubmed/30018880 http://dx.doi.org/10.5598/imafungus.2018.09.01.13 Text en © 2018 International Mycological Association http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
| spellingShingle | Article Wingfield, Brenda D. Bills, Gerald F. Dong, Yang Huang, Wenli Nel, Wilma J. Swalarsk-Parry, Benedicta S. Vaghefi, Niloofar Wilken, P. Markus An, Zhiqiang de Beer, Z. Wilhelm De Vos, Lieschen Chen, Li Duong, Tuan A. Gao, Yun Hammerbacher, Almuth Kikkert, Julie R. Li, Yan Li, Huiying Li, Kuan Li, Qiang Liu, Xingzhong Ma, Xiao Naidoo, Kershney Pethybridge, Sarah J. Sun, Jingzu Steenkamp, Emma T. van der Nest, Magriet A. van Wyk, Stephanie Wingfield, Michael J. Xiong, Chuan Yue, Qun Zhang, Xiaoling IMA Genome-F 9: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata |
| title | IMA Genome-F 9: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata |
| title_full | IMA Genome-F 9: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata |
| title_fullStr | IMA Genome-F 9: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata |
| title_full_unstemmed | IMA Genome-F 9: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata |
| title_short | IMA Genome-F 9: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata |
| title_sort | ima genome-f 9: draft genome sequence of annulohypoxylon stygium, aspergillus mulundensis, berkeleyomyces basicola (syn. thielaviopsis basicola), ceratocystis smalleyi, two cercospora beticola strains, coleophoma cylindrospora, fusarium fracticaudum, phialophora cf. hyalina, and morchella septimelata |
| topic | Article |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6048567/ https://www.ncbi.nlm.nih.gov/pubmed/30018880 http://dx.doi.org/10.5598/imafungus.2018.09.01.13 |
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