Cargando…

Structural and biochemical analysis of the dual-specificity Trm10 enzyme from Thermococcus kodakaraensis prompts reconsideration of its catalytic mechanism

tRNA molecules get heavily modified post-transcriptionally. The N-1 methylation of purines at position 9 of eukaryal and archaeal tRNA is catalyzed by the SPOUT methyltranferase Trm10. Remarkably, while certain Trm10 orthologs are specific for either guanosine or adenosine, others show a dual specif...

Descripción completa

Detalles Bibliográficos
Autores principales:	Singh, Ranjan Kumar, Feller, André, Roovers, Martine, Van Elder, Dany, Wauters, Lina, Droogmans, Louis, Versées, Wim
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory Press 2018
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6049504/ https://www.ncbi.nlm.nih.gov/pubmed/29848639 http://dx.doi.org/10.1261/rna.064345.117

Ejemplares similares

Structural and functional insights into tRNA binding and adenosine N1-methylation by an archaeal Trm10 homologue
por: Van Laer, Bart, et al.
Publicado: (2016)

Crystal structures of the tRNA:m(2)G6 methyltransferase Trm14/TrmN from two domains of life
por: Fislage, Marcus, et al.
Publicado: (2012)

5-methylcytosine-sensitive variants of Thermococcus kodakaraensis DNA polymerase
por: Huber, Claudia, et al.
Publicado: (2016)

Variants of sequence family B Thermococcus kodakaraensis DNA polymerase with increased mismatch extension selectivity
por: Huber, Claudia, et al.
Publicado: (2017)

Structural characterization of B. subtilis m(1)A(22) tRNA methyltransferase TrmK: insights into tRNA recognition
por: Dégut, Clément, et al.
Publicado: (2019)

The secretome of Thermococcus barophilus in the presence of carbohydrates and the potential role of the TrmBL4 regulator
por: Batour, Maria, et al.
Publicado: (2023)

The YqfN protein of Bacillus subtilis is the tRNA: m(1)A22 methyltransferase (TrmK)
por: Roovers, Martine, et al.
Publicado: (2008)

Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
por: Yun, Hye-Yeoung, et al.
Publicado: (2018)

Characterization of two homologous 2′-O-methyltransferases showing different specificities for their tRNA substrates
por: Somme, Jonathan, et al.
Publicado: (2014)

Structure of RadB recombinase from a hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1: an implication for the formation of a near-7-fold helical assembly
por: Akiba, Toshihiko, et al.
Publicado: (2005)

The Bacillus subtilis open reading frame ysgA encodes the SPOUT methyltransferase RlmP forming 2′-O-methylguanosine at position 2553 in the A-loop of 23S rRNA
por: Roovers, Martine, et al.
Publicado: (2022)

Histone and TK0471/TrmBL2 form a novel heterogeneous genome architecture in the hyperthermophilic archaeon Thermococcus kodakarensis
por: Maruyama, Hugo, et al.
Publicado: (2011)

Roco Proteins: GTPases with a Baroque Structure and Mechanism
por: Wauters, Lina, et al.
Publicado: (2019)

Serine 363 of a Hydrophobic Region of Archaeal Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase from Archaeoglobus fulgidus and Thermococcus kodakaraensis Affects CO(2)/O(2) Substrate Specificity and Oxygen Sensitivity
por: Kreel, Nathan E., et al.
Publicado: (2015)

Biochemical and genetic examination of two aminotransferases from the hyperthermophilic archaeon Thermococcus kodakarensis
por: Su, Yu, et al.
Publicado: (2023)

Post-Transcriptional Modifications of Conserved Nucleotides in the T-Loop of tRNA: A Tale of Functional Convergent Evolution
por: Roovers, Martine, et al.
Publicado: (2021)

Crystal structure of Bacillus subtilis TrmB, the tRNA (m(7)G46) methyltransferase
por: Zegers, Ingrid, et al.
Publicado: (2006)

Catalytic Intermediate Crystal Structures of Cysteine Desulfurase from the Archaeon Thermococcus onnurineus NA1
por: Ho, Thien-Hoang, et al.
Publicado: (2017)

Reconsideration of Laparoscopic Cholecystectomy
por: Kasuya, Kazuhiko, et al.
Publicado: (2011)

Genetics Techniques for Thermococcus kodakarensis
por: Hileman, Travis H., et al.
Publicado: (2012)

Thermostable adenosine 5′-monophosphate phosphorylase from Thermococcus kodakarensis forms catalytically active inclusion bodies
por: Kamel, Sarah, et al.
Publicado: (2021)

The Flexner Report: Commemoration and Reconsideration
por: Varughese, Heather, et al.
Publicado: (2010)

Cæsarean Section—A Reconsideration
por: Claye, A. M.
Publicado: (1951)

A Reconsideration of the Sense of Smell
por: Halliday, James L.
Publicado: (1926)

Taxonomic reconsideration of Prunusveitchii (Rosaceae)
por: Wu, Baohuan, et al.
Publicado: (2019)

The effect of therapy on TRM in psoriatic lesions
por: Owczarczyk-Saczonek, Agnieszka, et al.
Publicado: (2022)

Insights into Catalytic and tRNA Recognition Mechanism of the Dual-Specific tRNA Methyltransferase from Thermococcus kodakarensis
por: Krishnamohan, Aiswarya, et al.
Publicado: (2019)

The Arabidopsis TRM61/TRM6 complex is a bona fide tRNA N(1)-methyladenosine methyltransferase
por: Tang, Jun, et al.
Publicado: (2020)

Identification of a Trm732 Motif Required for 2′-O-methylation of the tRNA Anticodon Loop by Trm7
por: Funk, Holly M., et al.
Publicado: (2022)

Formate hydrogenlyase in the hyperthermophilic archaeon, Thermococcus litoralis
por: Takács, Mária, et al.
Publicado: (2008)

Biochemical reconstitution and genetic characterization of the major oxidative damage base excision DNA repair pathway in Thermococcus kodakarensis
por: Gehring, Alexandra M., et al.
Publicado: (2019)

Quantum Theory: Reconsideration of Foundations 6
por: Khrennikov, Andrei, et al.
Publicado: (2012)

Roman medicine and the legions: a reconsideration.
por: Scarborough, J
Publicado: (1968)

A Reconsideration of Acute Beryllium Disease
por: Cummings, Kristin J., et al.
Publicado: (2009)

Phylogenetic placement of Paratrichaptum and reconsideration of Gloeophyllales
por: Chen, C.-C., et al.
Publicado: (2019)

Reconsideration of recurrence and metastasis in colorectal cancer
por: Wang, Rui, et al.
Publicado: (2021)

Reconsideration of Sharp Dissection in Gynecological Surgery
por: Tanase, Yasuhito, et al.
Publicado: (2023)

Conservation of structure and mechanism by Trm5 enzymes
por: Christian, Thomas, et al.
Publicado: (2013)

Insights into molecular plasticity in protein complexes from Trm9-Trm112 tRNA modifying enzyme crystal structure
por: Létoquart, Juliette, et al.
Publicado: (2015)

Enhancing the Catalytic Activity of Thermo-Asparaginase from Thermococcus sibiricus by a Double Mesophilic-like Mutation in the Substrate-Binding Region
por: Dumina, Maria, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_27cq3eis0n6j6rvnjsqpjqhgh6