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Exploring hidden diversity in Southeast Asia’s Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding
Members of the freshwater halfbeak genus Dermogenys are hard to identify to the species level, despite several previous attempts to isolate fixed meristic, morphometric and colour pattern differences. This has led to ongoing confusion in scientific literature, records of species occurrence, and entr...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6050249/ https://www.ncbi.nlm.nih.gov/pubmed/30018357 http://dx.doi.org/10.1038/s41598-018-29049-7 |
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author | Nurul Farhana, Samsudin Muchlisin, Zainal Abidin Duong, Thuy Yen Tanyaros, Suwat Page, Larry M. Zhao, Yahui Adamson, Eleanor A. S. Khaironizam, Md. Zain de Bruyn, Mark Siti Azizah, Mohd Nor |
author_facet | Nurul Farhana, Samsudin Muchlisin, Zainal Abidin Duong, Thuy Yen Tanyaros, Suwat Page, Larry M. Zhao, Yahui Adamson, Eleanor A. S. Khaironizam, Md. Zain de Bruyn, Mark Siti Azizah, Mohd Nor |
author_sort | Nurul Farhana, Samsudin |
collection | PubMed |
description | Members of the freshwater halfbeak genus Dermogenys are hard to identify to the species level, despite several previous attempts to isolate fixed meristic, morphometric and colour pattern differences. This has led to ongoing confusion in scientific literature, records of species occurrence, and entries in museum collections. Here, a DNA barcoding study was conducted on the genus to gain further understanding of its taxonomic status across the Southeast Asian region. Fish were collected from 33 localities, spanning freshwater and brackish habitats in Malaysia, Western Indonesia, Thailand and Vietnam. In total, 290 samples of Dermogenys spp. were amplified for a 651 base pair fragment of the mitochondrial cytochrome oxidase c subunit I (COI) gene. Analysis was able to successfully differentiate the three species: D. collettei, D. siamensis, D. sumatrana; reveal the presence of a new putative species, Dermogenys sp., that was sampled in sympatry with D. collettei at three locations; as well as uncovering two genetic lineages of a fifth species, D. bispina, that display non-overlapping geographical distributions in drainages of northern Borneo; Kudat and Sandakan. This study expands the barcode library for Zenarchopteridae, demonstrates the efficacy of DNA barcoding techniques for differentiating Dermogenys species, and the potential thereof in species discovery. |
format | Online Article Text |
id | pubmed-6050249 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-60502492018-07-19 Exploring hidden diversity in Southeast Asia’s Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding Nurul Farhana, Samsudin Muchlisin, Zainal Abidin Duong, Thuy Yen Tanyaros, Suwat Page, Larry M. Zhao, Yahui Adamson, Eleanor A. S. Khaironizam, Md. Zain de Bruyn, Mark Siti Azizah, Mohd Nor Sci Rep Article Members of the freshwater halfbeak genus Dermogenys are hard to identify to the species level, despite several previous attempts to isolate fixed meristic, morphometric and colour pattern differences. This has led to ongoing confusion in scientific literature, records of species occurrence, and entries in museum collections. Here, a DNA barcoding study was conducted on the genus to gain further understanding of its taxonomic status across the Southeast Asian region. Fish were collected from 33 localities, spanning freshwater and brackish habitats in Malaysia, Western Indonesia, Thailand and Vietnam. In total, 290 samples of Dermogenys spp. were amplified for a 651 base pair fragment of the mitochondrial cytochrome oxidase c subunit I (COI) gene. Analysis was able to successfully differentiate the three species: D. collettei, D. siamensis, D. sumatrana; reveal the presence of a new putative species, Dermogenys sp., that was sampled in sympatry with D. collettei at three locations; as well as uncovering two genetic lineages of a fifth species, D. bispina, that display non-overlapping geographical distributions in drainages of northern Borneo; Kudat and Sandakan. This study expands the barcode library for Zenarchopteridae, demonstrates the efficacy of DNA barcoding techniques for differentiating Dermogenys species, and the potential thereof in species discovery. Nature Publishing Group UK 2018-07-17 /pmc/articles/PMC6050249/ /pubmed/30018357 http://dx.doi.org/10.1038/s41598-018-29049-7 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Nurul Farhana, Samsudin Muchlisin, Zainal Abidin Duong, Thuy Yen Tanyaros, Suwat Page, Larry M. Zhao, Yahui Adamson, Eleanor A. S. Khaironizam, Md. Zain de Bruyn, Mark Siti Azizah, Mohd Nor Exploring hidden diversity in Southeast Asia’s Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding |
title | Exploring hidden diversity in Southeast Asia’s Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding |
title_full | Exploring hidden diversity in Southeast Asia’s Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding |
title_fullStr | Exploring hidden diversity in Southeast Asia’s Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding |
title_full_unstemmed | Exploring hidden diversity in Southeast Asia’s Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding |
title_short | Exploring hidden diversity in Southeast Asia’s Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding |
title_sort | exploring hidden diversity in southeast asia’s dermogenys spp. (beloniformes: zenarchopteridae) through dna barcoding |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6050249/ https://www.ncbi.nlm.nih.gov/pubmed/30018357 http://dx.doi.org/10.1038/s41598-018-29049-7 |
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