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Impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast
Physiological fluctuations are expected to be a dominant source of noise in blood oxygenation level-dependent (BOLD) magnetic resonance imaging (MRI) experiments to assess tumour oxygenation and angiogenesis. This work investigates the impact of various physiological noise regressors: retrospective...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
IOP Publishing
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6050521/ https://www.ncbi.nlm.nih.gov/pubmed/27973353 http://dx.doi.org/10.1088/1361-6560/62/1/127 |
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author | Wallace, Tess E Manavaki, Roido Graves, Martin J Patterson, Andrew J Gilbert, Fiona J |
author_facet | Wallace, Tess E Manavaki, Roido Graves, Martin J Patterson, Andrew J Gilbert, Fiona J |
author_sort | Wallace, Tess E |
collection | PubMed |
description | Physiological fluctuations are expected to be a dominant source of noise in blood oxygenation level-dependent (BOLD) magnetic resonance imaging (MRI) experiments to assess tumour oxygenation and angiogenesis. This work investigates the impact of various physiological noise regressors: retrospective image correction (RETROICOR), heart rate (HR) and respiratory volume per unit time (RVT), on signal variance and the detection of BOLD contrast in the breast in response to a modulated respiratory stimulus. BOLD MRI was performed at 3 T in ten volunteers at rest and during cycles of oxygen and carbogen gas breathing. RETROICOR was optimized using F-tests to determine which cardiac and respiratory phase terms accounted for a significant amount of signal variance. A nested regression analysis was performed to assess the effect of RETROICOR, HR and RVT on the model fit residuals, temporal signal-to-noise ratio, and BOLD activation parameters. The optimized RETROICOR model accounted for the largest amount of signal variance ([Formula: see text] = 3.3 ± 2.1%) and improved the detection of BOLD activation (P = 0.002). Inclusion of HR and RVT regressors explained additional signal variance, but had a negative impact on activation parameter estimation (P < 0.001). Fluctuations in HR and RVT appeared to be correlated with the stimulus and may contribute to apparent BOLD signal reactivity. |
format | Online Article Text |
id | pubmed-6050521 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | IOP Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-60505212018-07-23 Impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast Wallace, Tess E Manavaki, Roido Graves, Martin J Patterson, Andrew J Gilbert, Fiona J Phys Med Biol Paper Physiological fluctuations are expected to be a dominant source of noise in blood oxygenation level-dependent (BOLD) magnetic resonance imaging (MRI) experiments to assess tumour oxygenation and angiogenesis. This work investigates the impact of various physiological noise regressors: retrospective image correction (RETROICOR), heart rate (HR) and respiratory volume per unit time (RVT), on signal variance and the detection of BOLD contrast in the breast in response to a modulated respiratory stimulus. BOLD MRI was performed at 3 T in ten volunteers at rest and during cycles of oxygen and carbogen gas breathing. RETROICOR was optimized using F-tests to determine which cardiac and respiratory phase terms accounted for a significant amount of signal variance. A nested regression analysis was performed to assess the effect of RETROICOR, HR and RVT on the model fit residuals, temporal signal-to-noise ratio, and BOLD activation parameters. The optimized RETROICOR model accounted for the largest amount of signal variance ([Formula: see text] = 3.3 ± 2.1%) and improved the detection of BOLD activation (P = 0.002). Inclusion of HR and RVT regressors explained additional signal variance, but had a negative impact on activation parameter estimation (P < 0.001). Fluctuations in HR and RVT appeared to be correlated with the stimulus and may contribute to apparent BOLD signal reactivity. IOP Publishing 2017-01-07 2016-12-13 /pmc/articles/PMC6050521/ /pubmed/27973353 http://dx.doi.org/10.1088/1361-6560/62/1/127 Text en © 2016 Institute of Physics and Engineering in Medicine http://creativecommons.org/licenses/by/3.0/ Original content from this work may be used under the terms of the Creative Commons Attribution 3.0 licence (http://creativecommons.org/licenses/by/3.0) . Any further distribution of this work must maintain attribution to the author(s) and the title of the work, journal citation and DOI. |
spellingShingle | Paper Wallace, Tess E Manavaki, Roido Graves, Martin J Patterson, Andrew J Gilbert, Fiona J Impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast |
title | Impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast |
title_full | Impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast |
title_fullStr | Impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast |
title_full_unstemmed | Impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast |
title_short | Impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast |
title_sort | impact of physiological noise correction on detecting blood oxygenation level-dependent contrast in the breast |
topic | Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6050521/ https://www.ncbi.nlm.nih.gov/pubmed/27973353 http://dx.doi.org/10.1088/1361-6560/62/1/127 |
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