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Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma
Accumulating evidence implies that long noncoding RNAs (lncRNAs) play a crucial role in predicting survival for Hepatocellular carcinoma (HCC) patients. This study aims to capture the current research hotspots of HCC, based on the analysis of publications related to HCC research from 2013 to 2017, a...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6051236/ https://www.ncbi.nlm.nih.gov/pubmed/29761859 http://dx.doi.org/10.1002/cam4.1541 |
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author | Sui, Jing Miao, Yan Han, Jiali Nan, Hongmei Shen, Bo Zhang, Xiaomei Zhang, Yan Wu, Yuan Wu, Wenjuan Liu, Tong Xu, Siyi Yang, Sheng Yin, Lihong Pu, Yuepu Liang, Geyu |
author_facet | Sui, Jing Miao, Yan Han, Jiali Nan, Hongmei Shen, Bo Zhang, Xiaomei Zhang, Yan Wu, Yuan Wu, Wenjuan Liu, Tong Xu, Siyi Yang, Sheng Yin, Lihong Pu, Yuepu Liang, Geyu |
author_sort | Sui, Jing |
collection | PubMed |
description | Accumulating evidence implies that long noncoding RNAs (lncRNAs) play a crucial role in predicting survival for Hepatocellular carcinoma (HCC) patients. This study aims to capture the current research hotspots of HCC, based on the analysis of publications related to HCC research from 2013 to 2017, and to identify a novel lncRNA signature for HCC prognosis through the data mining in The Cancer Genome Atlas (TCGA). “Prognosis” and “biomarker” were located in the core of the HCC research hotspot. Moreover, long noncoding RNA was the top one research frontier in HCC research. The associations between survival outcome and the expression of lncRNAs were evaluated by the univariate and multivariate Cox proportional hazards regression analyses. Four lncRNAs (LINC00261, TRELM3P, GBP1P1, and CDKN2B‐AS1) were identified as significantly correlated with overall survival (OS). These four lncRNAs were gathered as a single prognostic signature. There was a significant positive correlation between HCC patients with low‐risk scores and overall survival (HR = 1.802, 95%CI [1.224‐2.652], P = .003). Further analysis suggested that the prognostic value of this four‐lncRNA signature was independent in clinical features. The enrichment analysis of prognostic lncRNA‐related gene was performed to find out the related pathways. Our study indicates that this novel lncRNA expression signature may be a useful biomarker of the prognosis for HCC patients, based on bioinformatics analysis. |
format | Online Article Text |
id | pubmed-6051236 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-60512362018-07-20 Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma Sui, Jing Miao, Yan Han, Jiali Nan, Hongmei Shen, Bo Zhang, Xiaomei Zhang, Yan Wu, Yuan Wu, Wenjuan Liu, Tong Xu, Siyi Yang, Sheng Yin, Lihong Pu, Yuepu Liang, Geyu Cancer Med Cancer Biology Accumulating evidence implies that long noncoding RNAs (lncRNAs) play a crucial role in predicting survival for Hepatocellular carcinoma (HCC) patients. This study aims to capture the current research hotspots of HCC, based on the analysis of publications related to HCC research from 2013 to 2017, and to identify a novel lncRNA signature for HCC prognosis through the data mining in The Cancer Genome Atlas (TCGA). “Prognosis” and “biomarker” were located in the core of the HCC research hotspot. Moreover, long noncoding RNA was the top one research frontier in HCC research. The associations between survival outcome and the expression of lncRNAs were evaluated by the univariate and multivariate Cox proportional hazards regression analyses. Four lncRNAs (LINC00261, TRELM3P, GBP1P1, and CDKN2B‐AS1) were identified as significantly correlated with overall survival (OS). These four lncRNAs were gathered as a single prognostic signature. There was a significant positive correlation between HCC patients with low‐risk scores and overall survival (HR = 1.802, 95%CI [1.224‐2.652], P = .003). Further analysis suggested that the prognostic value of this four‐lncRNA signature was independent in clinical features. The enrichment analysis of prognostic lncRNA‐related gene was performed to find out the related pathways. Our study indicates that this novel lncRNA expression signature may be a useful biomarker of the prognosis for HCC patients, based on bioinformatics analysis. John Wiley and Sons Inc. 2018-05-15 /pmc/articles/PMC6051236/ /pubmed/29761859 http://dx.doi.org/10.1002/cam4.1541 Text en © 2018 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Cancer Biology Sui, Jing Miao, Yan Han, Jiali Nan, Hongmei Shen, Bo Zhang, Xiaomei Zhang, Yan Wu, Yuan Wu, Wenjuan Liu, Tong Xu, Siyi Yang, Sheng Yin, Lihong Pu, Yuepu Liang, Geyu Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma |
title | Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma |
title_full | Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma |
title_fullStr | Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma |
title_full_unstemmed | Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma |
title_short | Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma |
title_sort | systematic analyses of a novel lncrna‐associated signature as the prognostic biomarker for hepatocellular carcinoma |
topic | Cancer Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6051236/ https://www.ncbi.nlm.nih.gov/pubmed/29761859 http://dx.doi.org/10.1002/cam4.1541 |
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