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Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity

Lifespan varies dramatically among species, but the biological basis is not well understood. Previous studies in model organisms revealed the importance of nutrient sensing, mTOR, NAD/sirtuins, and insulin/IGF1 signaling in lifespan control. By studying life‐history traits and transcriptomes of 14 D...

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Autores principales: Ma, Siming, Avanesov, Andrei S., Porter, Emily, Lee, Byung Cheon, Mariotti, Marco, Zemskaya, Nadezhda, Guigo, Roderic, Moskalev, Alexey A., Gladyshev, Vadim N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6052463/
https://www.ncbi.nlm.nih.gov/pubmed/29671950
http://dx.doi.org/10.1111/acel.12740
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author Ma, Siming
Avanesov, Andrei S.
Porter, Emily
Lee, Byung Cheon
Mariotti, Marco
Zemskaya, Nadezhda
Guigo, Roderic
Moskalev, Alexey A.
Gladyshev, Vadim N.
author_facet Ma, Siming
Avanesov, Andrei S.
Porter, Emily
Lee, Byung Cheon
Mariotti, Marco
Zemskaya, Nadezhda
Guigo, Roderic
Moskalev, Alexey A.
Gladyshev, Vadim N.
author_sort Ma, Siming
collection PubMed
description Lifespan varies dramatically among species, but the biological basis is not well understood. Previous studies in model organisms revealed the importance of nutrient sensing, mTOR, NAD/sirtuins, and insulin/IGF1 signaling in lifespan control. By studying life‐history traits and transcriptomes of 14 Drosophila species differing more than sixfold in lifespan, we explored expression divergence and identified genes and processes that correlate with longevity. These longevity signatures suggested that longer‐lived flies upregulate fatty acid metabolism, downregulate neuronal system development and activin signaling, and alter dynamics of RNA splicing. Interestingly, these gene expression patterns resembled those of flies under dietary restriction and several other lifespan‐extending interventions, although on the individual gene level, there was no significant overlap with genes previously reported to have lifespan‐extension effects. We experimentally tested the lifespan regulation potential of several candidate genes and found no consistent effects, suggesting that individual genes generally do not explain the observed longevity patterns. Instead, it appears that lifespan regulation across species is modulated by complex relationships at the system level represented by global gene expression.
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spelling pubmed-60524632018-08-01 Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity Ma, Siming Avanesov, Andrei S. Porter, Emily Lee, Byung Cheon Mariotti, Marco Zemskaya, Nadezhda Guigo, Roderic Moskalev, Alexey A. Gladyshev, Vadim N. Aging Cell Original Articles Lifespan varies dramatically among species, but the biological basis is not well understood. Previous studies in model organisms revealed the importance of nutrient sensing, mTOR, NAD/sirtuins, and insulin/IGF1 signaling in lifespan control. By studying life‐history traits and transcriptomes of 14 Drosophila species differing more than sixfold in lifespan, we explored expression divergence and identified genes and processes that correlate with longevity. These longevity signatures suggested that longer‐lived flies upregulate fatty acid metabolism, downregulate neuronal system development and activin signaling, and alter dynamics of RNA splicing. Interestingly, these gene expression patterns resembled those of flies under dietary restriction and several other lifespan‐extending interventions, although on the individual gene level, there was no significant overlap with genes previously reported to have lifespan‐extension effects. We experimentally tested the lifespan regulation potential of several candidate genes and found no consistent effects, suggesting that individual genes generally do not explain the observed longevity patterns. Instead, it appears that lifespan regulation across species is modulated by complex relationships at the system level represented by global gene expression. John Wiley and Sons Inc. 2018-04-19 2018-08 /pmc/articles/PMC6052463/ /pubmed/29671950 http://dx.doi.org/10.1111/acel.12740 Text en © 2018 The Authors. Aging Cell published by the Anatomical Society and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Ma, Siming
Avanesov, Andrei S.
Porter, Emily
Lee, Byung Cheon
Mariotti, Marco
Zemskaya, Nadezhda
Guigo, Roderic
Moskalev, Alexey A.
Gladyshev, Vadim N.
Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity
title Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity
title_full Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity
title_fullStr Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity
title_full_unstemmed Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity
title_short Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity
title_sort comparative transcriptomics across 14 drosophila species reveals signatures of longevity
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6052463/
https://www.ncbi.nlm.nih.gov/pubmed/29671950
http://dx.doi.org/10.1111/acel.12740
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