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De novo assembly of bacterial genomes with repetitive DNA regions by dnaasm application
BACKGROUND: Many organisms, in particular bacteria, contain repetitive DNA fragments called tandem repeats. These structures are restored by DNA assemblers by mapping paired-end tags to unitigs, estimating the distance between them and filling the gap with the specified DNA motif, which could be rep...
Autores principales: | Kuśmirek, Wiktor, Nowak, Robert |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6052550/ https://www.ncbi.nlm.nih.gov/pubmed/30021513 http://dx.doi.org/10.1186/s12859-018-2281-4 |
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