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Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia

The advent of the DNA sequencing age has led to a revolution in biology. The rapid and cost‐effective generation of high‐quality sequence data has transformed many fields, including those focused on discovering species and surveying biodiversity, monitoring movement of biological materials, forensic...

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Autores principales: Dean, Gillian H., Asmarayani, Rani, Ardiyani, Marlina, Santika, Yessi, Triono, Teguh, Mathews, Sarah, Webb, Campbell O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6055555/
https://www.ncbi.nlm.nih.gov/pubmed/30131909
http://dx.doi.org/10.1002/aps3.1167
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author Dean, Gillian H.
Asmarayani, Rani
Ardiyani, Marlina
Santika, Yessi
Triono, Teguh
Mathews, Sarah
Webb, Campbell O.
author_facet Dean, Gillian H.
Asmarayani, Rani
Ardiyani, Marlina
Santika, Yessi
Triono, Teguh
Mathews, Sarah
Webb, Campbell O.
author_sort Dean, Gillian H.
collection PubMed
description The advent of the DNA sequencing age has led to a revolution in biology. The rapid and cost‐effective generation of high‐quality sequence data has transformed many fields, including those focused on discovering species and surveying biodiversity, monitoring movement of biological materials, forensic biology, and disease diagnostics. There is a need to build capacity to generate useful sequence data in countries with limited historical access to laboratory resources, so that researchers can benefit from the advantages offered by these data. Commonly used molecular techniques such as DNA extraction, PCR, and DNA sequencing are within the reach of small laboratories in many countries, with the main obstacles to successful implementation being lack of funding and limited practical experience. Here we describe a successful approach that we developed to obtain DNA sequence data during a small DNA barcoding project in Indonesia.
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spelling pubmed-60555552018-08-21 Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia Dean, Gillian H. Asmarayani, Rani Ardiyani, Marlina Santika, Yessi Triono, Teguh Mathews, Sarah Webb, Campbell O. Appl Plant Sci Review Articles The advent of the DNA sequencing age has led to a revolution in biology. The rapid and cost‐effective generation of high‐quality sequence data has transformed many fields, including those focused on discovering species and surveying biodiversity, monitoring movement of biological materials, forensic biology, and disease diagnostics. There is a need to build capacity to generate useful sequence data in countries with limited historical access to laboratory resources, so that researchers can benefit from the advantages offered by these data. Commonly used molecular techniques such as DNA extraction, PCR, and DNA sequencing are within the reach of small laboratories in many countries, with the main obstacles to successful implementation being lack of funding and limited practical experience. Here we describe a successful approach that we developed to obtain DNA sequence data during a small DNA barcoding project in Indonesia. John Wiley and Sons Inc. 2018-07-13 /pmc/articles/PMC6055555/ /pubmed/30131909 http://dx.doi.org/10.1002/aps3.1167 Text en Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Articles
Dean, Gillian H.
Asmarayani, Rani
Ardiyani, Marlina
Santika, Yessi
Triono, Teguh
Mathews, Sarah
Webb, Campbell O.
Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia
title Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia
title_full Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia
title_fullStr Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia
title_full_unstemmed Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia
title_short Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia
title_sort generating dna sequence data with limited resources for molecular biology: lessons from a barcoding project in indonesia
topic Review Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6055555/
https://www.ncbi.nlm.nih.gov/pubmed/30131909
http://dx.doi.org/10.1002/aps3.1167
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