SL-quant: a fast and flexible pipeline to quantify spliced leader trans-splicing events from RNA-seq data

BACKGROUND: The spliceosomal transfer of a short spliced leader (SL) RNA to an independent pre-mRNA molecule is called SL trans-splicing and is widespread in the nematode Caenorhabditis elegans. While RNA-sequencing (RNA-seq) data contain information on such events, properly documented methods to ex...

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Detalles Bibliográficos
Autores principales: Yague-Sanz, Carlo, Hermand, Damien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6055573/
https://www.ncbi.nlm.nih.gov/pubmed/30010768
http://dx.doi.org/10.1093/gigascience/giy084

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6055573/
https://www.ncbi.nlm.nih.gov/pubmed/30010768
http://dx.doi.org/10.1093/gigascience/giy084

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