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A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response
Translating fundamental biological discoveries from NASA Space Biology program into health risk from space flights has been an ongoing challenge. We propose to use NASA GeneLab database to gain new knowledge on potential systemic responses to space. Unbiased systems biology analysis of transcriptomi...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6059388/ https://www.ncbi.nlm.nih.gov/pubmed/30044882 http://dx.doi.org/10.1371/journal.pone.0199621 |
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author | Beheshti, Afshin Ray, Shayoni Fogle, Homer Berrios, Daniel Costes, Sylvain V. |
author_facet | Beheshti, Afshin Ray, Shayoni Fogle, Homer Berrios, Daniel Costes, Sylvain V. |
author_sort | Beheshti, Afshin |
collection | PubMed |
description | Translating fundamental biological discoveries from NASA Space Biology program into health risk from space flights has been an ongoing challenge. We propose to use NASA GeneLab database to gain new knowledge on potential systemic responses to space. Unbiased systems biology analysis of transcriptomic data from seven different rodent datasets reveals for the first time the existence of potential “master regulators” coordinating a systemic response to microgravity and/or space radiation with TGF-β1 being the most common regulator. We hypothesized the space environment leads to the release of biomolecules circulating inside the blood stream. Through datamining we identified 13 candidate microRNAs (miRNA) which are common in all studies and directly interact with TGF-β1 that can be potential circulating factors impacting space biology. This study exemplifies the utility of the GeneLab data repository to aid in the process of performing novel hypothesis–based research. |
format | Online Article Text |
id | pubmed-6059388 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-60593882018-08-06 A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response Beheshti, Afshin Ray, Shayoni Fogle, Homer Berrios, Daniel Costes, Sylvain V. PLoS One Research Article Translating fundamental biological discoveries from NASA Space Biology program into health risk from space flights has been an ongoing challenge. We propose to use NASA GeneLab database to gain new knowledge on potential systemic responses to space. Unbiased systems biology analysis of transcriptomic data from seven different rodent datasets reveals for the first time the existence of potential “master regulators” coordinating a systemic response to microgravity and/or space radiation with TGF-β1 being the most common regulator. We hypothesized the space environment leads to the release of biomolecules circulating inside the blood stream. Through datamining we identified 13 candidate microRNAs (miRNA) which are common in all studies and directly interact with TGF-β1 that can be potential circulating factors impacting space biology. This study exemplifies the utility of the GeneLab data repository to aid in the process of performing novel hypothesis–based research. Public Library of Science 2018-07-25 /pmc/articles/PMC6059388/ /pubmed/30044882 http://dx.doi.org/10.1371/journal.pone.0199621 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article Beheshti, Afshin Ray, Shayoni Fogle, Homer Berrios, Daniel Costes, Sylvain V. A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response |
title | A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response |
title_full | A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response |
title_fullStr | A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response |
title_full_unstemmed | A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response |
title_short | A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response |
title_sort | microrna signature and tgf-β1 response were identified as the key master regulators for spaceflight response |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6059388/ https://www.ncbi.nlm.nih.gov/pubmed/30044882 http://dx.doi.org/10.1371/journal.pone.0199621 |
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