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A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response

Translating fundamental biological discoveries from NASA Space Biology program into health risk from space flights has been an ongoing challenge. We propose to use NASA GeneLab database to gain new knowledge on potential systemic responses to space. Unbiased systems biology analysis of transcriptomi...

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Detalles Bibliográficos
Autores principales: Beheshti, Afshin, Ray, Shayoni, Fogle, Homer, Berrios, Daniel, Costes, Sylvain V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6059388/
https://www.ncbi.nlm.nih.gov/pubmed/30044882
http://dx.doi.org/10.1371/journal.pone.0199621
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author Beheshti, Afshin
Ray, Shayoni
Fogle, Homer
Berrios, Daniel
Costes, Sylvain V.
author_facet Beheshti, Afshin
Ray, Shayoni
Fogle, Homer
Berrios, Daniel
Costes, Sylvain V.
author_sort Beheshti, Afshin
collection PubMed
description Translating fundamental biological discoveries from NASA Space Biology program into health risk from space flights has been an ongoing challenge. We propose to use NASA GeneLab database to gain new knowledge on potential systemic responses to space. Unbiased systems biology analysis of transcriptomic data from seven different rodent datasets reveals for the first time the existence of potential “master regulators” coordinating a systemic response to microgravity and/or space radiation with TGF-β1 being the most common regulator. We hypothesized the space environment leads to the release of biomolecules circulating inside the blood stream. Through datamining we identified 13 candidate microRNAs (miRNA) which are common in all studies and directly interact with TGF-β1 that can be potential circulating factors impacting space biology. This study exemplifies the utility of the GeneLab data repository to aid in the process of performing novel hypothesis–based research.
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spelling pubmed-60593882018-08-06 A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response Beheshti, Afshin Ray, Shayoni Fogle, Homer Berrios, Daniel Costes, Sylvain V. PLoS One Research Article Translating fundamental biological discoveries from NASA Space Biology program into health risk from space flights has been an ongoing challenge. We propose to use NASA GeneLab database to gain new knowledge on potential systemic responses to space. Unbiased systems biology analysis of transcriptomic data from seven different rodent datasets reveals for the first time the existence of potential “master regulators” coordinating a systemic response to microgravity and/or space radiation with TGF-β1 being the most common regulator. We hypothesized the space environment leads to the release of biomolecules circulating inside the blood stream. Through datamining we identified 13 candidate microRNAs (miRNA) which are common in all studies and directly interact with TGF-β1 that can be potential circulating factors impacting space biology. This study exemplifies the utility of the GeneLab data repository to aid in the process of performing novel hypothesis–based research. Public Library of Science 2018-07-25 /pmc/articles/PMC6059388/ /pubmed/30044882 http://dx.doi.org/10.1371/journal.pone.0199621 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Beheshti, Afshin
Ray, Shayoni
Fogle, Homer
Berrios, Daniel
Costes, Sylvain V.
A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response
title A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response
title_full A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response
title_fullStr A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response
title_full_unstemmed A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response
title_short A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response
title_sort microrna signature and tgf-β1 response were identified as the key master regulators for spaceflight response
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6059388/
https://www.ncbi.nlm.nih.gov/pubmed/30044882
http://dx.doi.org/10.1371/journal.pone.0199621
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