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Genome Mining‐Mediated Discovery of a New Avermipeptin Analogue in Streptomyces actuosus ATCC 25421

Streptomyces actuosus ATCC 25421 was famous for producing thiopeptide nosiheptide, which has widely been used as a feed additive for the promotion of animal growth. Herein, we report the complete genome sequence of S. actuosus ATCC 25421, which consists of an 8,145,579‐bp circular chromosome with a...

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Autores principales: Liu, Weiying, Sun, Fengxian, Hu, Yang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6060280/
https://www.ncbi.nlm.nih.gov/pubmed/30065907
http://dx.doi.org/10.1002/open.201800130
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author Liu, Weiying
Sun, Fengxian
Hu, Yang
author_facet Liu, Weiying
Sun, Fengxian
Hu, Yang
author_sort Liu, Weiying
collection PubMed
description Streptomyces actuosus ATCC 25421 was famous for producing thiopeptide nosiheptide, which has widely been used as a feed additive for the promotion of animal growth. Herein, we report the complete genome sequence of S. actuosus ATCC 25421, which consists of an 8,145,579‐bp circular chromosome with a G+C content of 72.53 % containing 7 536 protein‐coding genes. The antiSMASH 3.0 program was used to identify 49 biosynthetic gene clusters for putative secondary metabolites, including a putative lantipeptide gene cluster that showed 85 % similarity to the reported informatipeptin biosynthetic gene cluster, indicating that the putative lantipeptide gene cluster has the ability to generate the informatipeptin analogue. Compared with avermipeptin, the lantipeptide precursor peptide (termed avermipeptin B) from S. actuosus ATCC 25421 contains a 14‐aa leader peptide and a 24‐aa core peptide, in which Ile15 was different from Val15 in avermipeptin. We also deduced the structure and the biosynthetic mechanism of avermipeptin B. Heterologous expression of the avermipeptin B biosynthetic gene cluster in S. lividans TK24 was characterized by high‐resolution mass spectrometry (ESI‐MS/MS). Finally, we found that avermipeptin B displayed strong activity against Gram‐positive strains. The genome sequence reported here can encourage us to mine novel secondary metabolites and investigate their biosynthetic mechanism in the future.
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spelling pubmed-60602802018-07-31 Genome Mining‐Mediated Discovery of a New Avermipeptin Analogue in Streptomyces actuosus ATCC 25421 Liu, Weiying Sun, Fengxian Hu, Yang ChemistryOpen Communications Streptomyces actuosus ATCC 25421 was famous for producing thiopeptide nosiheptide, which has widely been used as a feed additive for the promotion of animal growth. Herein, we report the complete genome sequence of S. actuosus ATCC 25421, which consists of an 8,145,579‐bp circular chromosome with a G+C content of 72.53 % containing 7 536 protein‐coding genes. The antiSMASH 3.0 program was used to identify 49 biosynthetic gene clusters for putative secondary metabolites, including a putative lantipeptide gene cluster that showed 85 % similarity to the reported informatipeptin biosynthetic gene cluster, indicating that the putative lantipeptide gene cluster has the ability to generate the informatipeptin analogue. Compared with avermipeptin, the lantipeptide precursor peptide (termed avermipeptin B) from S. actuosus ATCC 25421 contains a 14‐aa leader peptide and a 24‐aa core peptide, in which Ile15 was different from Val15 in avermipeptin. We also deduced the structure and the biosynthetic mechanism of avermipeptin B. Heterologous expression of the avermipeptin B biosynthetic gene cluster in S. lividans TK24 was characterized by high‐resolution mass spectrometry (ESI‐MS/MS). Finally, we found that avermipeptin B displayed strong activity against Gram‐positive strains. The genome sequence reported here can encourage us to mine novel secondary metabolites and investigate their biosynthetic mechanism in the future. John Wiley and Sons Inc. 2018-07-25 /pmc/articles/PMC6060280/ /pubmed/30065907 http://dx.doi.org/10.1002/open.201800130 Text en © 2018 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Communications
Liu, Weiying
Sun, Fengxian
Hu, Yang
Genome Mining‐Mediated Discovery of a New Avermipeptin Analogue in Streptomyces actuosus ATCC 25421
title Genome Mining‐Mediated Discovery of a New Avermipeptin Analogue in Streptomyces actuosus ATCC 25421
title_full Genome Mining‐Mediated Discovery of a New Avermipeptin Analogue in Streptomyces actuosus ATCC 25421
title_fullStr Genome Mining‐Mediated Discovery of a New Avermipeptin Analogue in Streptomyces actuosus ATCC 25421
title_full_unstemmed Genome Mining‐Mediated Discovery of a New Avermipeptin Analogue in Streptomyces actuosus ATCC 25421
title_short Genome Mining‐Mediated Discovery of a New Avermipeptin Analogue in Streptomyces actuosus ATCC 25421
title_sort genome mining‐mediated discovery of a new avermipeptin analogue in streptomyces actuosus atcc 25421
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6060280/
https://www.ncbi.nlm.nih.gov/pubmed/30065907
http://dx.doi.org/10.1002/open.201800130
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