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A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias
AIM: Verification bias is one of the major problems encountered in diagnostic accuracy studies. It occurs when a standard test performed on a non-representative subsample of subjects which have undergone the diagnostic test. In this study we extend a Bayesian model to correct this bias. METHODS: The...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Republic of Macedonia
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6062283/ https://www.ncbi.nlm.nih.gov/pubmed/30087725 http://dx.doi.org/10.3889/oamjms.2018.296 |
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author | Hajivandi, Abdollah Shirazi, Hamid Reza Ghafarian Saadat, Seyed Hassan Chehrazi, Mohammad |
author_facet | Hajivandi, Abdollah Shirazi, Hamid Reza Ghafarian Saadat, Seyed Hassan Chehrazi, Mohammad |
author_sort | Hajivandi, Abdollah |
collection | PubMed |
description | AIM: Verification bias is one of the major problems encountered in diagnostic accuracy studies. It occurs when a standard test performed on a non-representative subsample of subjects which have undergone the diagnostic test. In this study we extend a Bayesian model to correct this bias. METHODS: The study population is patients that have undergone at least two repeated failed IVF/ICSI (in vitro fertilization/intra cytoplasmic sperm injection) cycles. Patients were screened using ultrasonography and those with polyps were recommended for hysteroscopy. A Bayesian modeling was applied on mechanism of missing data using an informative prior on disease prevalence. The parameters of the model were estimated through Markov Chain Monte Carlo methods. RESULTS: A total of 238 patients were screened, 47 of which had polyps. Those with polyps were strongly recommended to undergo hysteroscopy, 47/47 decide to have a hysteroscopy and in 37/47 polyps confirmed. None of the 191 patients with no polyps detected in ultrasonography underwent a hysteroscopy. A model using Bayesian approach was applied with informative prior on polyp prevalence. False and true negatives were estimated in the Bayesian framework. The false negative was obtained 14 and 177 true negatives were obtained, so sensitivity and specificity was estimated easily after estimating the missing data. Sensitivity and specificity were equal to 74% and 94% respectively. CONCLUSION: Bayesian analyses with informative prior seem to be powerful tools in the simulation of experimental space. |
format | Online Article Text |
id | pubmed-6062283 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Republic of Macedonia |
record_format | MEDLINE/PubMed |
spelling | pubmed-60622832018-08-07 A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias Hajivandi, Abdollah Shirazi, Hamid Reza Ghafarian Saadat, Seyed Hassan Chehrazi, Mohammad Open Access Maced J Med Sci Basic Science AIM: Verification bias is one of the major problems encountered in diagnostic accuracy studies. It occurs when a standard test performed on a non-representative subsample of subjects which have undergone the diagnostic test. In this study we extend a Bayesian model to correct this bias. METHODS: The study population is patients that have undergone at least two repeated failed IVF/ICSI (in vitro fertilization/intra cytoplasmic sperm injection) cycles. Patients were screened using ultrasonography and those with polyps were recommended for hysteroscopy. A Bayesian modeling was applied on mechanism of missing data using an informative prior on disease prevalence. The parameters of the model were estimated through Markov Chain Monte Carlo methods. RESULTS: A total of 238 patients were screened, 47 of which had polyps. Those with polyps were strongly recommended to undergo hysteroscopy, 47/47 decide to have a hysteroscopy and in 37/47 polyps confirmed. None of the 191 patients with no polyps detected in ultrasonography underwent a hysteroscopy. A model using Bayesian approach was applied with informative prior on polyp prevalence. False and true negatives were estimated in the Bayesian framework. The false negative was obtained 14 and 177 true negatives were obtained, so sensitivity and specificity was estimated easily after estimating the missing data. Sensitivity and specificity were equal to 74% and 94% respectively. CONCLUSION: Bayesian analyses with informative prior seem to be powerful tools in the simulation of experimental space. Republic of Macedonia 2018-07-17 /pmc/articles/PMC6062283/ /pubmed/30087725 http://dx.doi.org/10.3889/oamjms.2018.296 Text en Copyright: © 2018 Abdollah Hajivandi, Hamid Reza Ghafarian Shirazi, Seyed Hassan Saadat, Mohammad Chehrazi http://creativecommons.org/licenses/CC BY-NC/4.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (CC BY-NC 4.0). |
spellingShingle | Basic Science Hajivandi, Abdollah Shirazi, Hamid Reza Ghafarian Saadat, Seyed Hassan Chehrazi, Mohammad A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias |
title | A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias |
title_full | A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias |
title_fullStr | A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias |
title_full_unstemmed | A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias |
title_short | A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias |
title_sort | bayesian analysis with informative prior on disease prevalence for predicting missing values due to verification bias |
topic | Basic Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6062283/ https://www.ncbi.nlm.nih.gov/pubmed/30087725 http://dx.doi.org/10.3889/oamjms.2018.296 |
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