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A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias

AIM: Verification bias is one of the major problems encountered in diagnostic accuracy studies. It occurs when a standard test performed on a non-representative subsample of subjects which have undergone the diagnostic test. In this study we extend a Bayesian model to correct this bias. METHODS: The...

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Autores principales: Hajivandi, Abdollah, Shirazi, Hamid Reza Ghafarian, Saadat, Seyed Hassan, Chehrazi, Mohammad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Republic of Macedonia 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6062283/
https://www.ncbi.nlm.nih.gov/pubmed/30087725
http://dx.doi.org/10.3889/oamjms.2018.296
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author Hajivandi, Abdollah
Shirazi, Hamid Reza Ghafarian
Saadat, Seyed Hassan
Chehrazi, Mohammad
author_facet Hajivandi, Abdollah
Shirazi, Hamid Reza Ghafarian
Saadat, Seyed Hassan
Chehrazi, Mohammad
author_sort Hajivandi, Abdollah
collection PubMed
description AIM: Verification bias is one of the major problems encountered in diagnostic accuracy studies. It occurs when a standard test performed on a non-representative subsample of subjects which have undergone the diagnostic test. In this study we extend a Bayesian model to correct this bias. METHODS: The study population is patients that have undergone at least two repeated failed IVF/ICSI (in vitro fertilization/intra cytoplasmic sperm injection) cycles. Patients were screened using ultrasonography and those with polyps were recommended for hysteroscopy. A Bayesian modeling was applied on mechanism of missing data using an informative prior on disease prevalence. The parameters of the model were estimated through Markov Chain Monte Carlo methods. RESULTS: A total of 238 patients were screened, 47 of which had polyps. Those with polyps were strongly recommended to undergo hysteroscopy, 47/47 decide to have a hysteroscopy and in 37/47 polyps confirmed. None of the 191 patients with no polyps detected in ultrasonography underwent a hysteroscopy. A model using Bayesian approach was applied with informative prior on polyp prevalence. False and true negatives were estimated in the Bayesian framework. The false negative was obtained 14 and 177 true negatives were obtained, so sensitivity and specificity was estimated easily after estimating the missing data. Sensitivity and specificity were equal to 74% and 94% respectively. CONCLUSION: Bayesian analyses with informative prior seem to be powerful tools in the simulation of experimental space.
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spelling pubmed-60622832018-08-07 A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias Hajivandi, Abdollah Shirazi, Hamid Reza Ghafarian Saadat, Seyed Hassan Chehrazi, Mohammad Open Access Maced J Med Sci Basic Science AIM: Verification bias is one of the major problems encountered in diagnostic accuracy studies. It occurs when a standard test performed on a non-representative subsample of subjects which have undergone the diagnostic test. In this study we extend a Bayesian model to correct this bias. METHODS: The study population is patients that have undergone at least two repeated failed IVF/ICSI (in vitro fertilization/intra cytoplasmic sperm injection) cycles. Patients were screened using ultrasonography and those with polyps were recommended for hysteroscopy. A Bayesian modeling was applied on mechanism of missing data using an informative prior on disease prevalence. The parameters of the model were estimated through Markov Chain Monte Carlo methods. RESULTS: A total of 238 patients were screened, 47 of which had polyps. Those with polyps were strongly recommended to undergo hysteroscopy, 47/47 decide to have a hysteroscopy and in 37/47 polyps confirmed. None of the 191 patients with no polyps detected in ultrasonography underwent a hysteroscopy. A model using Bayesian approach was applied with informative prior on polyp prevalence. False and true negatives were estimated in the Bayesian framework. The false negative was obtained 14 and 177 true negatives were obtained, so sensitivity and specificity was estimated easily after estimating the missing data. Sensitivity and specificity were equal to 74% and 94% respectively. CONCLUSION: Bayesian analyses with informative prior seem to be powerful tools in the simulation of experimental space. Republic of Macedonia 2018-07-17 /pmc/articles/PMC6062283/ /pubmed/30087725 http://dx.doi.org/10.3889/oamjms.2018.296 Text en Copyright: © 2018 Abdollah Hajivandi, Hamid Reza Ghafarian Shirazi, Seyed Hassan Saadat, Mohammad Chehrazi http://creativecommons.org/licenses/CC BY-NC/4.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (CC BY-NC 4.0).
spellingShingle Basic Science
Hajivandi, Abdollah
Shirazi, Hamid Reza Ghafarian
Saadat, Seyed Hassan
Chehrazi, Mohammad
A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias
title A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias
title_full A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias
title_fullStr A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias
title_full_unstemmed A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias
title_short A Bayesian Analysis With Informative Prior on Disease Prevalence for Predicting Missing Values Due To Verification Bias
title_sort bayesian analysis with informative prior on disease prevalence for predicting missing values due to verification bias
topic Basic Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6062283/
https://www.ncbi.nlm.nih.gov/pubmed/30087725
http://dx.doi.org/10.3889/oamjms.2018.296
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