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Dynamical networks: Finding, measuring, and tracking neural population activity using network science
Systems neuroscience is in a headlong rush to record from as many neurons at the same time as possible. As the brain computes and codes using neuron populations, it is hoped these data will uncover the fundamentals of neural computation. But with hundreds, thousands, or more simultaneously recorded...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MIT Press
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063717/ https://www.ncbi.nlm.nih.gov/pubmed/30090869 http://dx.doi.org/10.1162/NETN_a_00020 |
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author | Humphries, Mark D. |
author_facet | Humphries, Mark D. |
author_sort | Humphries, Mark D. |
collection | PubMed |
description | Systems neuroscience is in a headlong rush to record from as many neurons at the same time as possible. As the brain computes and codes using neuron populations, it is hoped these data will uncover the fundamentals of neural computation. But with hundreds, thousands, or more simultaneously recorded neurons come the inescapable problems of visualizing, describing, and quantifying their interactions. Here I argue that network science provides a set of scalable, analytical tools that already solve these problems. By treating neurons as nodes and their interactions as links, a single network can visualize and describe an arbitrarily large recording. I show that with this description we can quantify the effects of manipulating a neural circuit, track changes in population dynamics over time, and quantitatively define theoretical concepts of neural populations such as cell assemblies. Using network science as a core part of analyzing population recordings will thus provide both qualitative and quantitative advances to our understanding of neural computation. |
format | Online Article Text |
id | pubmed-6063717 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MIT Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-60637172018-08-06 Dynamical networks: Finding, measuring, and tracking neural population activity using network science Humphries, Mark D. Netw Neurosci Perspective Systems neuroscience is in a headlong rush to record from as many neurons at the same time as possible. As the brain computes and codes using neuron populations, it is hoped these data will uncover the fundamentals of neural computation. But with hundreds, thousands, or more simultaneously recorded neurons come the inescapable problems of visualizing, describing, and quantifying their interactions. Here I argue that network science provides a set of scalable, analytical tools that already solve these problems. By treating neurons as nodes and their interactions as links, a single network can visualize and describe an arbitrarily large recording. I show that with this description we can quantify the effects of manipulating a neural circuit, track changes in population dynamics over time, and quantitatively define theoretical concepts of neural populations such as cell assemblies. Using network science as a core part of analyzing population recordings will thus provide both qualitative and quantitative advances to our understanding of neural computation. MIT Press 2017-12-01 /pmc/articles/PMC6063717/ /pubmed/30090869 http://dx.doi.org/10.1162/NETN_a_00020 Text en © 2017 Massachusetts Institute of Technology http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Perspective Humphries, Mark D. Dynamical networks: Finding, measuring, and tracking neural population activity using network science |
title | Dynamical networks: Finding, measuring, and tracking neural population activity using network science |
title_full | Dynamical networks: Finding, measuring, and tracking neural population activity using network science |
title_fullStr | Dynamical networks: Finding, measuring, and tracking neural population activity using network science |
title_full_unstemmed | Dynamical networks: Finding, measuring, and tracking neural population activity using network science |
title_short | Dynamical networks: Finding, measuring, and tracking neural population activity using network science |
title_sort | dynamical networks: finding, measuring, and tracking neural population activity using network science |
topic | Perspective |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063717/ https://www.ncbi.nlm.nih.gov/pubmed/30090869 http://dx.doi.org/10.1162/NETN_a_00020 |
work_keys_str_mv | AT humphriesmarkd dynamicalnetworksfindingmeasuringandtrackingneuralpopulationactivityusingnetworkscience |