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Multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: A comparison and validation study
Autism spectrum disorder (ASD) is a developmental disorder which is currently only diagnosed through behavioral testing. Impaired folate‐dependent one carbon metabolism (FOCM) and transsulfuration (TS) pathways have been implicated in ASD, and recently a study involving multivariate analysis based u...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063877/ https://www.ncbi.nlm.nih.gov/pubmed/30065970 http://dx.doi.org/10.1002/btm2.10095 |
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author | Howsmon, Daniel P. Vargason, Troy Rubin, Robert A. Delhey, Leanna Tippett, Marie Rose, Shannon Bennuri, Sirish C. Slattery, John C. Melnyk, Stepan James, S. Jill Frye, Richard E. Hahn, Juergen |
author_facet | Howsmon, Daniel P. Vargason, Troy Rubin, Robert A. Delhey, Leanna Tippett, Marie Rose, Shannon Bennuri, Sirish C. Slattery, John C. Melnyk, Stepan James, S. Jill Frye, Richard E. Hahn, Juergen |
author_sort | Howsmon, Daniel P. |
collection | PubMed |
description | Autism spectrum disorder (ASD) is a developmental disorder which is currently only diagnosed through behavioral testing. Impaired folate‐dependent one carbon metabolism (FOCM) and transsulfuration (TS) pathways have been implicated in ASD, and recently a study involving multivariate analysis based upon Fisher Discriminant Analysis returned very promising results for predicting an ASD diagnosis. This article takes another step toward the goal of developing a biochemical diagnostic for ASD by comparing five classification algorithms on existing data of FOCM/TS metabolites, and also validating the classification results with new data from an ASD cohort. The comparison results indicate a high sensitivity and specificity for the original data set and up to a 88% correct classification of the ASD cohort at an expected 5% misclassification rate for typically‐developing controls. These results form the foundation for the development of a biochemical test for ASD which promises to aid diagnosis of ASD and provide biochemical understanding of the disease, applicable to at least a subset of the ASD population. |
format | Online Article Text |
id | pubmed-6063877 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-60638772018-07-31 Multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: A comparison and validation study Howsmon, Daniel P. Vargason, Troy Rubin, Robert A. Delhey, Leanna Tippett, Marie Rose, Shannon Bennuri, Sirish C. Slattery, John C. Melnyk, Stepan James, S. Jill Frye, Richard E. Hahn, Juergen Bioeng Transl Med Research Reports Autism spectrum disorder (ASD) is a developmental disorder which is currently only diagnosed through behavioral testing. Impaired folate‐dependent one carbon metabolism (FOCM) and transsulfuration (TS) pathways have been implicated in ASD, and recently a study involving multivariate analysis based upon Fisher Discriminant Analysis returned very promising results for predicting an ASD diagnosis. This article takes another step toward the goal of developing a biochemical diagnostic for ASD by comparing five classification algorithms on existing data of FOCM/TS metabolites, and also validating the classification results with new data from an ASD cohort. The comparison results indicate a high sensitivity and specificity for the original data set and up to a 88% correct classification of the ASD cohort at an expected 5% misclassification rate for typically‐developing controls. These results form the foundation for the development of a biochemical test for ASD which promises to aid diagnosis of ASD and provide biochemical understanding of the disease, applicable to at least a subset of the ASD population. John Wiley and Sons Inc. 2018-06-19 /pmc/articles/PMC6063877/ /pubmed/30065970 http://dx.doi.org/10.1002/btm2.10095 Text en © 2018 The Authors. Bioengineering & Translational Medicine is published by Wiley Periodicals, Inc. on behalf of The American Institute of Chemical Engineers This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Reports Howsmon, Daniel P. Vargason, Troy Rubin, Robert A. Delhey, Leanna Tippett, Marie Rose, Shannon Bennuri, Sirish C. Slattery, John C. Melnyk, Stepan James, S. Jill Frye, Richard E. Hahn, Juergen Multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: A comparison and validation study |
title | Multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: A comparison and validation study |
title_full | Multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: A comparison and validation study |
title_fullStr | Multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: A comparison and validation study |
title_full_unstemmed | Multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: A comparison and validation study |
title_short | Multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: A comparison and validation study |
title_sort | multivariate techniques enable a biochemical classification of children with autism spectrum disorder versus typically‐developing peers: a comparison and validation study |
topic | Research Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063877/ https://www.ncbi.nlm.nih.gov/pubmed/30065970 http://dx.doi.org/10.1002/btm2.10095 |
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