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Radiomic analysis of contrast-enhanced ultrasound data
Radiomics describes the use radiological data in a quantitative manner to establish correlations in between imaging biomarkers and clinical outcomes to improve disease diagnosis, treatment monitoring and prediction of therapy responses. In this study, we evaluated whether a radiomic analysis on cont...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063906/ https://www.ncbi.nlm.nih.gov/pubmed/30054518 http://dx.doi.org/10.1038/s41598-018-29653-7 |
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author | Theek, Benjamin Opacic, Tatjana Magnuska, Zuzanna Lammers, Twan Kiessling, Fabian |
author_facet | Theek, Benjamin Opacic, Tatjana Magnuska, Zuzanna Lammers, Twan Kiessling, Fabian |
author_sort | Theek, Benjamin |
collection | PubMed |
description | Radiomics describes the use radiological data in a quantitative manner to establish correlations in between imaging biomarkers and clinical outcomes to improve disease diagnosis, treatment monitoring and prediction of therapy responses. In this study, we evaluated whether a radiomic analysis on contrast-enhanced ultrasound (CEUS) data allows to automatically differentiate three xenograft mouse tumour models. Next to conventional imaging biomarker classes, i.e. intensity-based, textural, and wavelet-based features, we included biomarkers describing morphological and functional characteristics of the tumour vasculature. In total, 235 imaging biomarkers were extracted and evaluated. Dedicated feature selection allowed us to identify user-independent and stable imaging biomarkers for each imaging biomarker class. The selected radiomic signature, composed of median image intensity, energy of grey-level co-occurrence matrix, vessel network length, and run length nonuniformity of the grey-level run length matrix from the diagonal details, was used to train a linear support vector machine (SVM) to classify tumour phenotypes. The model was trained by using a four-fold cross-validation scheme and achieved 82.1% (95% CI [0.64 0.92]) correct classifications. In conclusion, our results show that a radiomic analysis can be successfully performed on CEUS data and may help to render ultrasound-based tumour imaging more accurate, reproducible and reliable. |
format | Online Article Text |
id | pubmed-6063906 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-60639062018-07-31 Radiomic analysis of contrast-enhanced ultrasound data Theek, Benjamin Opacic, Tatjana Magnuska, Zuzanna Lammers, Twan Kiessling, Fabian Sci Rep Article Radiomics describes the use radiological data in a quantitative manner to establish correlations in between imaging biomarkers and clinical outcomes to improve disease diagnosis, treatment monitoring and prediction of therapy responses. In this study, we evaluated whether a radiomic analysis on contrast-enhanced ultrasound (CEUS) data allows to automatically differentiate three xenograft mouse tumour models. Next to conventional imaging biomarker classes, i.e. intensity-based, textural, and wavelet-based features, we included biomarkers describing morphological and functional characteristics of the tumour vasculature. In total, 235 imaging biomarkers were extracted and evaluated. Dedicated feature selection allowed us to identify user-independent and stable imaging biomarkers for each imaging biomarker class. The selected radiomic signature, composed of median image intensity, energy of grey-level co-occurrence matrix, vessel network length, and run length nonuniformity of the grey-level run length matrix from the diagonal details, was used to train a linear support vector machine (SVM) to classify tumour phenotypes. The model was trained by using a four-fold cross-validation scheme and achieved 82.1% (95% CI [0.64 0.92]) correct classifications. In conclusion, our results show that a radiomic analysis can be successfully performed on CEUS data and may help to render ultrasound-based tumour imaging more accurate, reproducible and reliable. Nature Publishing Group UK 2018-07-27 /pmc/articles/PMC6063906/ /pubmed/30054518 http://dx.doi.org/10.1038/s41598-018-29653-7 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Theek, Benjamin Opacic, Tatjana Magnuska, Zuzanna Lammers, Twan Kiessling, Fabian Radiomic analysis of contrast-enhanced ultrasound data |
title | Radiomic analysis of contrast-enhanced ultrasound data |
title_full | Radiomic analysis of contrast-enhanced ultrasound data |
title_fullStr | Radiomic analysis of contrast-enhanced ultrasound data |
title_full_unstemmed | Radiomic analysis of contrast-enhanced ultrasound data |
title_short | Radiomic analysis of contrast-enhanced ultrasound data |
title_sort | radiomic analysis of contrast-enhanced ultrasound data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063906/ https://www.ncbi.nlm.nih.gov/pubmed/30054518 http://dx.doi.org/10.1038/s41598-018-29653-7 |
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