Cargando…

Genome-wide atlas of alternative polyadenylation in the forage legume red clover

Studies on prevalence and significance of alternative polyadenylation (APA) in plants have been so far limited mostly to the model plants. Here, a genome-wide analysis of APA was carried out in different tissue types in the non-model forage legume red clover (Trifolium pratense L). A profile of poly...

Descripción completa

Detalles Bibliográficos
Autores principales:	Chakrabarti, Manohar, Dinkins, Randy D., Hunt, Arthur G.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2018
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063945/ https://www.ncbi.nlm.nih.gov/pubmed/30054540 http://dx.doi.org/10.1038/s41598-018-29699-7

Ejemplares similares

CPSF30 at the Interface of Alternative Polyadenylation and Cellular Signaling in Plants
por: Chakrabarti, Manohar, et al.
Publicado: (2015)

Distinctive interactions of the Arabidopsis homolog of the 30 kD subunit of the cleavage and polyadenylation specificity factor (AtCPSF30) with other polyadenylation factor subunits
por: Rao, Suryadevara, et al.
Publicado: (2009)

Expression and Variation of the Genes Involved in Rhizobium Nodulation in Red Clover
por: Dinkins, Randy D., et al.
Publicado: (2022)

Identification of Single Nucleotide Polymorphism in Red Clover (Trifolium pratense L.) Using Targeted Genomic Amplicon Sequencing and RNA-seq
por: Li, Wenli, et al.
Publicado: (2019)

Genome-wide dynamics of alternative polyadenylation in rice
por: Fu, Haihui, et al.
Publicado: (2016)

Experimental Genome-Wide Determination of RNA Polyadenylation in Chlamydomonas reinhardtii
por: Bell, Stephen A., et al.
Publicado: (2016)

Genome-wide mapping of polyadenylation sites in fission yeast reveals widespread alternative polyadenylation
por: Mata, Juan
Publicado: (2013)

Chromosome-scale assembly of the highly heterozygous genome of red clover (Trifolium pratense L.), an allogamous forage crop species
por: Bickhart, Derek M., et al.
Publicado: (2022)

TREND-DB—a transcriptome-wide atlas of the dynamic landscape of alternative polyadenylation
por: Marini, Federico, et al.
Publicado: (2020)

Red Clover (Trifolium pratense) and Zigzag Clover (T. medium) – A Picture of Genomic Similarities and Differences
por: Dluhošová, Jana, et al.
Publicado: (2018)

Genome-wide identification and predictive modeling of tissue-specific alternative polyadenylation
por: Hafez, Dina, et al.
Publicado: (2013)

Temporal changes in genetic diversity and forage yield of perennial ryegrass in monoculture and in combination with red clover in swards
por: Verwimp, Christophe, et al.
Publicado: (2018)

The Impacts of Domestication and Breeding on Nitrogen Fixation Symbiosis in Legumes
por: Liu, Jinge, et al.
Publicado: (2020)

Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants
por: Hunt, Arthur G, et al.
Publicado: (2012)

RNA Regulatory Elements and Polyadenylation in Plants
por: Hunt, Arthur G.
Publicado: (2012)

Cost-effective detection of genome-wide signatures for 2,4-D herbicide resistance adaptation in red clover
por: Benevenuto, Juliana, et al.
Publicado: (2019)

Phenotypic variation and quantitative trait loci for resistance to southern anthracnose and clover rot in red clover
por: Frey, Lea A., et al.
Publicado: (2022)

Differential genome-wide profiling of alternative polyadenylation sites in nasopharyngeal carcinoma by high-throughput sequencing
por: Xu, Ya-Fei, et al.
Publicado: (2018)

Interplay between splicing and transcriptional pausing exerts genome-wide control over alternative polyadenylation
por: Mora Gallardo, Carmen, et al.
Publicado: (2021)

Genome-wide alternative polyadenylation dynamics underlying plant growth retardant-induced dwarfing of pomegranate
por: Xia, Xinhui, et al.
Publicado: (2023)

Effect of nanoparticles on red clover and its symbiotic microorganisms
por: Moll, Janine, et al.
Publicado: (2016)

A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin
por: Zanotto, Stefano, et al.
Publicado: (2023)

Characterization of mRNA polyadenylation in the apicomplexa
por: Stevens, Ashley T., et al.
Publicado: (2018)

Alternative polyadenylation of cyclooxygenase-2
por: Hall-Pogar, Tyra, et al.
Publicado: (2005)

Alternative Polyadenylation in Human Diseases
por: Chang, Jae-Woong, et al.
Publicado: (2017)

Application of red clover isoflavone extract as an adjuvant in mice
por: Chen, Hongbo, et al.
Publicado: (2020)

Discovering candidate SNPs for resilience breeding of red clover
por: Osterman, Johanna, et al.
Publicado: (2022)

Genome-wide profiling reveals cancer-related genes with switched alternative polyadenylation sites in colorectal cancer
por: Yang, Xiaochen, et al.
Publicado: (2018)

Transcriptome analysis of drought-tolerant sorghum genotype SC56 in response to water stress reveals an oxidative stress defense strategy
por: Azzouz-Olden, Farida, et al.
Publicado: (2020)

Determination of Phytoestrogen Content in Fresh-Cut Legume Forage
por: Hloucalová, Pavlína, et al.
Publicado: (2016)

Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea
por: Lakshmanan, Vairavan, et al.
Publicado: (2016)

Modeling of Genome-Wide Polyadenylation Signals in Xenopus tropicalis
por: Zhu, Sheng, et al.
Publicado: (2019)

Glucocorticoids mediate transcriptome‐wide alternative polyadenylation: Potential mechanistic and clinical implications
por: Nguyen, Thanh Thanh L., et al.
Publicado: (2022)

scAPAatlas: an atlas of alternative polyadenylation across cell types in human and mouse
por: Yang, Xiaoxiao, et al.
Publicado: (2021)

Alternative Polyadenylation and Salicylic Acid Modulate Root Responses to Low Nitrogen Availability
por: Conesa, Carlos M., et al.
Publicado: (2020)

Genome-wide profiling reveals alternative polyadenylation of mRNA in human non-small cell lung cancer
por: Zhang, Shirong, et al.
Publicado: (2019)

Genome-Wide Profiling Reveals Alternative Polyadenylation of Innate Immune-Related mRNA in Patients With COVID-19
por: An, Sanqi, et al.
Publicado: (2021)

Biased alternative polyadenylation in human tissues
por: Zhang, Haibo, et al.
Publicado: (2005)

Alternative Polyadenylation: Methods, Findings, and Impacts
por: Chen, Wei, et al.
Publicado: (2017)

Editorial: Alternative Polyadenylation in Development and Disease
por: Pai, Athma A., et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_aujpaqara5mi6li2idnaojojt2