Cargando…

Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies

BACKGROUND: Hemispherical photography (HP) is a popular method to estimate canopy structure and understorey light environment, which analyses photographs acquired with wide view-angle lens (i.e. fisheye lens). To increase HP accuracy, the approaches of most previous studies were to increase the prec...

Descripción completa

Detalles Bibliográficos
Autores principales: Song, Guo-Zhang M., Chao, Kuo-Jung, Doley, David, Yates, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6064577/
https://www.ncbi.nlm.nih.gov/pubmed/30056474
http://dx.doi.org/10.1186/s40529-018-0235-9
_version_ 1783342719635030016
author Song, Guo-Zhang M.
Chao, Kuo-Jung
Doley, David
Yates, David
author_facet Song, Guo-Zhang M.
Chao, Kuo-Jung
Doley, David
Yates, David
author_sort Song, Guo-Zhang M.
collection PubMed
description BACKGROUND: Hemispherical photography (HP) is a popular method to estimate canopy structure and understorey light environment, which analyses photographs acquired with wide view-angle lens (i.e. fisheye lens). To increase HP accuracy, the approaches of most previous studies were to increase the preciseness of exposure and thresholding of photographs, while ours quantified effects of canopy properties (gap fraction and length of sky-canopy border (SCB)) and errors of exposure and thresholding on the accuracy of HP. RESULTS: Through analysing photographs of real and model canopies, it was showed that HP inaccuracy resulted from the mismatch between exposure and thresholding rather than exposure or thresholding errors alone. HP inaccuracy was a function of the SCB length and the extent of exposure and thresholding errors, but independent of gap fraction. DISCUSSION: In photographs, SCBs are recorded as grey pixels which greyness is in between that of sky and canopy pixels. When there are exposure and thresholding errors, grey pixels are those prone to be misclassified in image analysis. Longer (vegetation with taller canopies) and wider (lower image sharpness) SCBs in photographs can both result in a higher amount of grey pixels and ultimately higher HP inaccuracy for a given extent of exposure and threshold errors. CONCLUSIONS: Using lenses with view angle narrower rather than that of fisheye lens can shorten the SCB length in photographs and in turn reduce HP estimation inaccuracy for canopy structure and understorey light environment. Since short SCBs and low levels of exposure and thresholding errors can both result in low HP inaccuracy, to identify the true performance of new exposure and thresholding methods for HP, photographs recording canopies with long SCBs and acquired with fisheye lenses should be used. Because HP inaccuracy in a function of the amount of grey pixels resulting from SCBs, the amount of these pixels in photographs can be used as a universal parameter to quantify canopy properties influential to HP estimation and in turn make cross-study comparisons feasible. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40529-018-0235-9) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-6064577
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Springer Berlin Heidelberg
record_format MEDLINE/PubMed
spelling pubmed-60645772018-08-10 Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies Song, Guo-Zhang M. Chao, Kuo-Jung Doley, David Yates, David Bot Stud Original Article BACKGROUND: Hemispherical photography (HP) is a popular method to estimate canopy structure and understorey light environment, which analyses photographs acquired with wide view-angle lens (i.e. fisheye lens). To increase HP accuracy, the approaches of most previous studies were to increase the preciseness of exposure and thresholding of photographs, while ours quantified effects of canopy properties (gap fraction and length of sky-canopy border (SCB)) and errors of exposure and thresholding on the accuracy of HP. RESULTS: Through analysing photographs of real and model canopies, it was showed that HP inaccuracy resulted from the mismatch between exposure and thresholding rather than exposure or thresholding errors alone. HP inaccuracy was a function of the SCB length and the extent of exposure and thresholding errors, but independent of gap fraction. DISCUSSION: In photographs, SCBs are recorded as grey pixels which greyness is in between that of sky and canopy pixels. When there are exposure and thresholding errors, grey pixels are those prone to be misclassified in image analysis. Longer (vegetation with taller canopies) and wider (lower image sharpness) SCBs in photographs can both result in a higher amount of grey pixels and ultimately higher HP inaccuracy for a given extent of exposure and threshold errors. CONCLUSIONS: Using lenses with view angle narrower rather than that of fisheye lens can shorten the SCB length in photographs and in turn reduce HP estimation inaccuracy for canopy structure and understorey light environment. Since short SCBs and low levels of exposure and thresholding errors can both result in low HP inaccuracy, to identify the true performance of new exposure and thresholding methods for HP, photographs recording canopies with long SCBs and acquired with fisheye lenses should be used. Because HP inaccuracy in a function of the amount of grey pixels resulting from SCBs, the amount of these pixels in photographs can be used as a universal parameter to quantify canopy properties influential to HP estimation and in turn make cross-study comparisons feasible. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40529-018-0235-9) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2018-07-28 /pmc/articles/PMC6064577/ /pubmed/30056474 http://dx.doi.org/10.1186/s40529-018-0235-9 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Article
Song, Guo-Zhang M.
Chao, Kuo-Jung
Doley, David
Yates, David
Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies
title Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies
title_full Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies
title_fullStr Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies
title_full_unstemmed Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies
title_short Sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies
title_sort sky-canopy border length, exposure and thresholding influence accuracy of hemispherical photography for complex plant canopies
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6064577/
https://www.ncbi.nlm.nih.gov/pubmed/30056474
http://dx.doi.org/10.1186/s40529-018-0235-9
work_keys_str_mv AT songguozhangm skycanopyborderlengthexposureandthresholdinginfluenceaccuracyofhemisphericalphotographyforcomplexplantcanopies
AT chaokuojung skycanopyborderlengthexposureandthresholdinginfluenceaccuracyofhemisphericalphotographyforcomplexplantcanopies
AT doleydavid skycanopyborderlengthexposureandthresholdinginfluenceaccuracyofhemisphericalphotographyforcomplexplantcanopies
AT yatesdavid skycanopyborderlengthexposureandthresholdinginfluenceaccuracyofhemisphericalphotographyforcomplexplantcanopies