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Predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network
Ocular images play an essential role in ophthalmology. Current research mainly focuses on computer-aided diagnosis using slit-lamp images, however few studies have been done to predict the progression of ophthalmic disease. Therefore exploring an effective approach of prediction can help to plan tre...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6067742/ https://www.ncbi.nlm.nih.gov/pubmed/30063738 http://dx.doi.org/10.1371/journal.pone.0201142 |
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author | Jiang, Jiewei Liu, Xiyang Liu, Lin Wang, Shuai Long, Erping Yang, Haoqing Yuan, Fuqiang Yu, Deying Zhang, Kai Wang, Liming Liu, Zhenzhen Wang, Dongni Xi, Changzun Lin, Zhuoling Wu, Xiaohang Cui, Jiangtao Zhu, Mingmin Lin, Haotian |
author_facet | Jiang, Jiewei Liu, Xiyang Liu, Lin Wang, Shuai Long, Erping Yang, Haoqing Yuan, Fuqiang Yu, Deying Zhang, Kai Wang, Liming Liu, Zhenzhen Wang, Dongni Xi, Changzun Lin, Zhuoling Wu, Xiaohang Cui, Jiangtao Zhu, Mingmin Lin, Haotian |
author_sort | Jiang, Jiewei |
collection | PubMed |
description | Ocular images play an essential role in ophthalmology. Current research mainly focuses on computer-aided diagnosis using slit-lamp images, however few studies have been done to predict the progression of ophthalmic disease. Therefore exploring an effective approach of prediction can help to plan treatment strategies and to provide early warning for the patients. In this study, we present an end-to-end temporal sequence network (TempSeq-Net) to automatically predict the progression of ophthalmic disease, which includes employing convolutional neural network (CNN) to extract high-level features from consecutive slit-lamp images and applying long short term memory (LSTM) method to mine the temporal relationship of features. First, we comprehensively compare six potential combinations of CNNs and LSTM (or recurrent neural network) in terms of effectiveness and efficiency, to obtain the optimal TempSeq-Net model. Second, we analyze the impacts of sequence lengths on model’s performance which help to evaluate their stability and validity and to determine the appropriate range of sequence lengths. The quantitative results demonstrated that our proposed model offers exceptional performance with mean accuracy (92.22), sensitivity (88.55), specificity (94.31) and AUC (97.18). Moreover, the model achieves real-time prediction with only 27.6ms for single sequence, and simultaneously predicts sequence data with lengths of 3–5. Our study provides a promising strategy for the progression of ophthalmic disease, and has the potential to be applied in other medical fields. |
format | Online Article Text |
id | pubmed-6067742 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-60677422018-08-10 Predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network Jiang, Jiewei Liu, Xiyang Liu, Lin Wang, Shuai Long, Erping Yang, Haoqing Yuan, Fuqiang Yu, Deying Zhang, Kai Wang, Liming Liu, Zhenzhen Wang, Dongni Xi, Changzun Lin, Zhuoling Wu, Xiaohang Cui, Jiangtao Zhu, Mingmin Lin, Haotian PLoS One Research Article Ocular images play an essential role in ophthalmology. Current research mainly focuses on computer-aided diagnosis using slit-lamp images, however few studies have been done to predict the progression of ophthalmic disease. Therefore exploring an effective approach of prediction can help to plan treatment strategies and to provide early warning for the patients. In this study, we present an end-to-end temporal sequence network (TempSeq-Net) to automatically predict the progression of ophthalmic disease, which includes employing convolutional neural network (CNN) to extract high-level features from consecutive slit-lamp images and applying long short term memory (LSTM) method to mine the temporal relationship of features. First, we comprehensively compare six potential combinations of CNNs and LSTM (or recurrent neural network) in terms of effectiveness and efficiency, to obtain the optimal TempSeq-Net model. Second, we analyze the impacts of sequence lengths on model’s performance which help to evaluate their stability and validity and to determine the appropriate range of sequence lengths. The quantitative results demonstrated that our proposed model offers exceptional performance with mean accuracy (92.22), sensitivity (88.55), specificity (94.31) and AUC (97.18). Moreover, the model achieves real-time prediction with only 27.6ms for single sequence, and simultaneously predicts sequence data with lengths of 3–5. Our study provides a promising strategy for the progression of ophthalmic disease, and has the potential to be applied in other medical fields. Public Library of Science 2018-07-31 /pmc/articles/PMC6067742/ /pubmed/30063738 http://dx.doi.org/10.1371/journal.pone.0201142 Text en © 2018 Jiang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Jiang, Jiewei Liu, Xiyang Liu, Lin Wang, Shuai Long, Erping Yang, Haoqing Yuan, Fuqiang Yu, Deying Zhang, Kai Wang, Liming Liu, Zhenzhen Wang, Dongni Xi, Changzun Lin, Zhuoling Wu, Xiaohang Cui, Jiangtao Zhu, Mingmin Lin, Haotian Predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network |
title | Predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network |
title_full | Predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network |
title_fullStr | Predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network |
title_full_unstemmed | Predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network |
title_short | Predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network |
title_sort | predicting the progression of ophthalmic disease based on slit-lamp images using a deep temporal sequence network |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6067742/ https://www.ncbi.nlm.nih.gov/pubmed/30063738 http://dx.doi.org/10.1371/journal.pone.0201142 |
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