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Optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data

Color vision deficiency (CVD) affects more than 4% of the population and leads to a different visual perception of colors. Though this has been known for decades, colormaps with many colors across the visual spectra are often used to represent data, leading to the potential for misinterpretation or...

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Autores principales: Nuñez, Jamie R., Anderton, Christopher R., Renslow, Ryan S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070163/
https://www.ncbi.nlm.nih.gov/pubmed/30067751
http://dx.doi.org/10.1371/journal.pone.0199239
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author Nuñez, Jamie R.
Anderton, Christopher R.
Renslow, Ryan S.
author_facet Nuñez, Jamie R.
Anderton, Christopher R.
Renslow, Ryan S.
author_sort Nuñez, Jamie R.
collection PubMed
description Color vision deficiency (CVD) affects more than 4% of the population and leads to a different visual perception of colors. Though this has been known for decades, colormaps with many colors across the visual spectra are often used to represent data, leading to the potential for misinterpretation or difficulty with interpretation by someone with this deficiency. Until the creation of the module presented here, there were no colormaps mathematically optimized for CVD using modern color appearance models. While there have been some attempts to make aesthetically pleasing or subjectively tolerable colormaps for those with CVD, our goal was to make optimized colormaps for the most accurate perception of scientific data by as many viewers as possible. We developed a Python module, cmaputil, to create CVD-optimized colormaps, which imports colormaps and modifies them to be perceptually uniform in CVD-safe colorspace while linearizing and maximizing the brightness range. The module is made available to the science community to enable others to easily create their own CVD-optimized colormaps. Here, we present an example CVD-optimized colormap created with this module that is optimized for viewing by those without a CVD as well as those with red-green colorblindness. This colormap, cividis, enables nearly-identical visual-data interpretation to both groups, is perceptually uniform in hue and brightness, and increases in brightness linearly.
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spelling pubmed-60701632018-08-09 Optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data Nuñez, Jamie R. Anderton, Christopher R. Renslow, Ryan S. PLoS One Research Article Color vision deficiency (CVD) affects more than 4% of the population and leads to a different visual perception of colors. Though this has been known for decades, colormaps with many colors across the visual spectra are often used to represent data, leading to the potential for misinterpretation or difficulty with interpretation by someone with this deficiency. Until the creation of the module presented here, there were no colormaps mathematically optimized for CVD using modern color appearance models. While there have been some attempts to make aesthetically pleasing or subjectively tolerable colormaps for those with CVD, our goal was to make optimized colormaps for the most accurate perception of scientific data by as many viewers as possible. We developed a Python module, cmaputil, to create CVD-optimized colormaps, which imports colormaps and modifies them to be perceptually uniform in CVD-safe colorspace while linearizing and maximizing the brightness range. The module is made available to the science community to enable others to easily create their own CVD-optimized colormaps. Here, we present an example CVD-optimized colormap created with this module that is optimized for viewing by those without a CVD as well as those with red-green colorblindness. This colormap, cividis, enables nearly-identical visual-data interpretation to both groups, is perceptually uniform in hue and brightness, and increases in brightness linearly. Public Library of Science 2018-08-01 /pmc/articles/PMC6070163/ /pubmed/30067751 http://dx.doi.org/10.1371/journal.pone.0199239 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Nuñez, Jamie R.
Anderton, Christopher R.
Renslow, Ryan S.
Optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data
title Optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data
title_full Optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data
title_fullStr Optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data
title_full_unstemmed Optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data
title_short Optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data
title_sort optimizing colormaps with consideration for color vision deficiency to enable accurate interpretation of scientific data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070163/
https://www.ncbi.nlm.nih.gov/pubmed/30067751
http://dx.doi.org/10.1371/journal.pone.0199239
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