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Identification of a Torque Teno Mini Virus (TTMV) in Hodgkin’s Lymphoma Patients
At least 12% of human cancers are caused by virus infection. To understand whether other viruses are associated with human cancers, a viral metagenomics approach was used to analyze the composition of the viral communities of the serum of the patients with Hodgkin’s lymphoma (HL) and non-Hodgkin lym...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070622/ https://www.ncbi.nlm.nih.gov/pubmed/30093892 http://dx.doi.org/10.3389/fmicb.2018.01680 |
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author | Pan, Shaokun Yu, Tian Wang, Yanchun Lu, Renquan Wang, Huijie Xie, Youhua Feng, Xiping |
author_facet | Pan, Shaokun Yu, Tian Wang, Yanchun Lu, Renquan Wang, Huijie Xie, Youhua Feng, Xiping |
author_sort | Pan, Shaokun |
collection | PubMed |
description | At least 12% of human cancers are caused by virus infection. To understand whether other viruses are associated with human cancers, a viral metagenomics approach was used to analyze the composition of the viral communities of the serum of the patients with Hodgkin’s lymphoma (HL) and non-Hodgkin lymphoma. In this report, a human anellovirus TTMV named TTMV-SH was discovered from three patients with HL. The complete genome of TTMV-SH is 2812nt in length. Phylogenetic analysis based on ORF1 indicated that TTMV-SH of the 11 isolates cluster with TTMV strain TLMV-CBD231 sharing only 60.3–62% sequence similarity, and the sequences divergence is 41.5–43.1%, which indicates that TTMV-SH is a novel species. The TTMV-SH prevalence in HL group, especially in nodular sclerosing Hodgkin’s lymphomas (NSHL), was significantly higher than in the healthy group implicated that the TTMV-SH may be associated with HL, especially NSHL. |
format | Online Article Text |
id | pubmed-6070622 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-60706222018-08-09 Identification of a Torque Teno Mini Virus (TTMV) in Hodgkin’s Lymphoma Patients Pan, Shaokun Yu, Tian Wang, Yanchun Lu, Renquan Wang, Huijie Xie, Youhua Feng, Xiping Front Microbiol Microbiology At least 12% of human cancers are caused by virus infection. To understand whether other viruses are associated with human cancers, a viral metagenomics approach was used to analyze the composition of the viral communities of the serum of the patients with Hodgkin’s lymphoma (HL) and non-Hodgkin lymphoma. In this report, a human anellovirus TTMV named TTMV-SH was discovered from three patients with HL. The complete genome of TTMV-SH is 2812nt in length. Phylogenetic analysis based on ORF1 indicated that TTMV-SH of the 11 isolates cluster with TTMV strain TLMV-CBD231 sharing only 60.3–62% sequence similarity, and the sequences divergence is 41.5–43.1%, which indicates that TTMV-SH is a novel species. The TTMV-SH prevalence in HL group, especially in nodular sclerosing Hodgkin’s lymphomas (NSHL), was significantly higher than in the healthy group implicated that the TTMV-SH may be associated with HL, especially NSHL. Frontiers Media S.A. 2018-07-26 /pmc/articles/PMC6070622/ /pubmed/30093892 http://dx.doi.org/10.3389/fmicb.2018.01680 Text en Copyright © 2018 Pan, Yu, Wang, Lu, Wang, Xie and Feng. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Pan, Shaokun Yu, Tian Wang, Yanchun Lu, Renquan Wang, Huijie Xie, Youhua Feng, Xiping Identification of a Torque Teno Mini Virus (TTMV) in Hodgkin’s Lymphoma Patients |
title | Identification of a Torque Teno Mini Virus (TTMV) in Hodgkin’s Lymphoma Patients |
title_full | Identification of a Torque Teno Mini Virus (TTMV) in Hodgkin’s Lymphoma Patients |
title_fullStr | Identification of a Torque Teno Mini Virus (TTMV) in Hodgkin’s Lymphoma Patients |
title_full_unstemmed | Identification of a Torque Teno Mini Virus (TTMV) in Hodgkin’s Lymphoma Patients |
title_short | Identification of a Torque Teno Mini Virus (TTMV) in Hodgkin’s Lymphoma Patients |
title_sort | identification of a torque teno mini virus (ttmv) in hodgkin’s lymphoma patients |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070622/ https://www.ncbi.nlm.nih.gov/pubmed/30093892 http://dx.doi.org/10.3389/fmicb.2018.01680 |
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