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Kinetic analysis and structural studies of a high‐efficiency laccase from Cerrena sp. RSD1

A high‐efficiency laccase, DLac, was isolated from Cerrena sp. RSD1. The kinetic studies indicate that DLac is a diffusion‐limited enzyme. The crystal structure of DLac was determined to atomic resolution, and its overall structure shares high homology to monomeric laccases, but displays unique subs...

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Autores principales: Wu, Meng‐Hsuan, Lee, Cheng‐Chung, Hsiao, An‐Shan, Yu, Su‐May, Wang, Andrew H.‐J., Ho, Tuan‐Hua David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070645/
https://www.ncbi.nlm.nih.gov/pubmed/30087829
http://dx.doi.org/10.1002/2211-5463.12459
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author Wu, Meng‐Hsuan
Lee, Cheng‐Chung
Hsiao, An‐Shan
Yu, Su‐May
Wang, Andrew H.‐J.
Ho, Tuan‐Hua David
author_facet Wu, Meng‐Hsuan
Lee, Cheng‐Chung
Hsiao, An‐Shan
Yu, Su‐May
Wang, Andrew H.‐J.
Ho, Tuan‐Hua David
author_sort Wu, Meng‐Hsuan
collection PubMed
description A high‐efficiency laccase, DLac, was isolated from Cerrena sp. RSD1. The kinetic studies indicate that DLac is a diffusion‐limited enzyme. The crystal structure of DLac was determined to atomic resolution, and its overall structure shares high homology to monomeric laccases, but displays unique substrate‐binding loops from those in other laccases. The substrate‐binding residues with small side chain and the short substrate‐binding loop IV broaden the substrate‐binding cavity and may facilitate large substrate diffusion. Unlike highly glycosylated fungal laccases, the less‐glycosylated DLac contains one highly conserved glycosylation site at N432 and an unique glycosylation site at N468. The N‐glycans stabilize the substrate‐binding loops and the protein structure, and the first N‐acetylglucosamine is crucial for the catalytic efficiency. Additionally, a fivefold increase in protein yield is achieved via the submerged culture method for industrial applications. DATABASE: The atomic coordinates of the structure of DLac from Cerrena sp. RSD1 and structural factors have been deposited in the RCSB Protein Data Bank (PDB ID: 5Z1X).
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spelling pubmed-60706452018-08-07 Kinetic analysis and structural studies of a high‐efficiency laccase from Cerrena sp. RSD1 Wu, Meng‐Hsuan Lee, Cheng‐Chung Hsiao, An‐Shan Yu, Su‐May Wang, Andrew H.‐J. Ho, Tuan‐Hua David FEBS Open Bio Research Articles A high‐efficiency laccase, DLac, was isolated from Cerrena sp. RSD1. The kinetic studies indicate that DLac is a diffusion‐limited enzyme. The crystal structure of DLac was determined to atomic resolution, and its overall structure shares high homology to monomeric laccases, but displays unique substrate‐binding loops from those in other laccases. The substrate‐binding residues with small side chain and the short substrate‐binding loop IV broaden the substrate‐binding cavity and may facilitate large substrate diffusion. Unlike highly glycosylated fungal laccases, the less‐glycosylated DLac contains one highly conserved glycosylation site at N432 and an unique glycosylation site at N468. The N‐glycans stabilize the substrate‐binding loops and the protein structure, and the first N‐acetylglucosamine is crucial for the catalytic efficiency. Additionally, a fivefold increase in protein yield is achieved via the submerged culture method for industrial applications. DATABASE: The atomic coordinates of the structure of DLac from Cerrena sp. RSD1 and structural factors have been deposited in the RCSB Protein Data Bank (PDB ID: 5Z1X). John Wiley and Sons Inc. 2018-07-03 /pmc/articles/PMC6070645/ /pubmed/30087829 http://dx.doi.org/10.1002/2211-5463.12459 Text en © 2018 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Wu, Meng‐Hsuan
Lee, Cheng‐Chung
Hsiao, An‐Shan
Yu, Su‐May
Wang, Andrew H.‐J.
Ho, Tuan‐Hua David
Kinetic analysis and structural studies of a high‐efficiency laccase from Cerrena sp. RSD1
title Kinetic analysis and structural studies of a high‐efficiency laccase from Cerrena sp. RSD1
title_full Kinetic analysis and structural studies of a high‐efficiency laccase from Cerrena sp. RSD1
title_fullStr Kinetic analysis and structural studies of a high‐efficiency laccase from Cerrena sp. RSD1
title_full_unstemmed Kinetic analysis and structural studies of a high‐efficiency laccase from Cerrena sp. RSD1
title_short Kinetic analysis and structural studies of a high‐efficiency laccase from Cerrena sp. RSD1
title_sort kinetic analysis and structural studies of a high‐efficiency laccase from cerrena sp. rsd1
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070645/
https://www.ncbi.nlm.nih.gov/pubmed/30087829
http://dx.doi.org/10.1002/2211-5463.12459
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