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Over a Thousand Years of Evolutionary History of Domestic Geese from Russian Archaeological Sites, Analysed Using Ancient DNA

The European domestic goose is a widely farmed species known to have descended from the wild greylag goose (Anser anser). However, the evolutionary history of this domesticate is still poorly known. Ancient DNA studies have been useful for many species, but there has been little such work on geese....

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Autores principales: Honka, Johanna, Heino, Matti T., Kvist, Laura, Askeyev, Igor V., Shaymuratova, Dilyara N., Askeyev, Oleg V., Askeyev, Arthur O., Heikkinen, Marja E., Searle, Jeremy B., Aspi, Jouni
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070935/
https://www.ncbi.nlm.nih.gov/pubmed/30037043
http://dx.doi.org/10.3390/genes9070367
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author Honka, Johanna
Heino, Matti T.
Kvist, Laura
Askeyev, Igor V.
Shaymuratova, Dilyara N.
Askeyev, Oleg V.
Askeyev, Arthur O.
Heikkinen, Marja E.
Searle, Jeremy B.
Aspi, Jouni
author_facet Honka, Johanna
Heino, Matti T.
Kvist, Laura
Askeyev, Igor V.
Shaymuratova, Dilyara N.
Askeyev, Oleg V.
Askeyev, Arthur O.
Heikkinen, Marja E.
Searle, Jeremy B.
Aspi, Jouni
author_sort Honka, Johanna
collection PubMed
description The European domestic goose is a widely farmed species known to have descended from the wild greylag goose (Anser anser). However, the evolutionary history of this domesticate is still poorly known. Ancient DNA studies have been useful for many species, but there has been little such work on geese. We have studied temporal genetic variation among domestic goose specimens excavated from Russian archaeological sites (4th–18th centuries) using a 204 base pair fragment of the mitochondrial control region. Specimens fell into three different genetic clades: the domestic D-haplogroup, the F-haplogroup that includes both wild and domestic geese, and a clade comprising another species, the taiga bean goose. Most of the subfossil geese carried typical domestic D-haplotypes. The domestication status of the geese carrying F-haplotypes is less certain, as the haplotypes identified were not present among modern domestic geese and could represent wild geese (misclassified as domestics), introgression from wild geese, or local domestication events. The bones of taiga bean goose were most probably misidentified as domestic goose but the domestication of bean goose or hybridization with domestic goose is also possible. Samples from the 4th to 10th century were clearly differentiated from the later time periods due to a haplotype that was found only in this early period, but otherwise no temporal or geographical variation in haplotype frequencies was apparent.
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spelling pubmed-60709352018-08-09 Over a Thousand Years of Evolutionary History of Domestic Geese from Russian Archaeological Sites, Analysed Using Ancient DNA Honka, Johanna Heino, Matti T. Kvist, Laura Askeyev, Igor V. Shaymuratova, Dilyara N. Askeyev, Oleg V. Askeyev, Arthur O. Heikkinen, Marja E. Searle, Jeremy B. Aspi, Jouni Genes (Basel) Article The European domestic goose is a widely farmed species known to have descended from the wild greylag goose (Anser anser). However, the evolutionary history of this domesticate is still poorly known. Ancient DNA studies have been useful for many species, but there has been little such work on geese. We have studied temporal genetic variation among domestic goose specimens excavated from Russian archaeological sites (4th–18th centuries) using a 204 base pair fragment of the mitochondrial control region. Specimens fell into three different genetic clades: the domestic D-haplogroup, the F-haplogroup that includes both wild and domestic geese, and a clade comprising another species, the taiga bean goose. Most of the subfossil geese carried typical domestic D-haplotypes. The domestication status of the geese carrying F-haplotypes is less certain, as the haplotypes identified were not present among modern domestic geese and could represent wild geese (misclassified as domestics), introgression from wild geese, or local domestication events. The bones of taiga bean goose were most probably misidentified as domestic goose but the domestication of bean goose or hybridization with domestic goose is also possible. Samples from the 4th to 10th century were clearly differentiated from the later time periods due to a haplotype that was found only in this early period, but otherwise no temporal or geographical variation in haplotype frequencies was apparent. MDPI 2018-07-20 /pmc/articles/PMC6070935/ /pubmed/30037043 http://dx.doi.org/10.3390/genes9070367 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Honka, Johanna
Heino, Matti T.
Kvist, Laura
Askeyev, Igor V.
Shaymuratova, Dilyara N.
Askeyev, Oleg V.
Askeyev, Arthur O.
Heikkinen, Marja E.
Searle, Jeremy B.
Aspi, Jouni
Over a Thousand Years of Evolutionary History of Domestic Geese from Russian Archaeological Sites, Analysed Using Ancient DNA
title Over a Thousand Years of Evolutionary History of Domestic Geese from Russian Archaeological Sites, Analysed Using Ancient DNA
title_full Over a Thousand Years of Evolutionary History of Domestic Geese from Russian Archaeological Sites, Analysed Using Ancient DNA
title_fullStr Over a Thousand Years of Evolutionary History of Domestic Geese from Russian Archaeological Sites, Analysed Using Ancient DNA
title_full_unstemmed Over a Thousand Years of Evolutionary History of Domestic Geese from Russian Archaeological Sites, Analysed Using Ancient DNA
title_short Over a Thousand Years of Evolutionary History of Domestic Geese from Russian Archaeological Sites, Analysed Using Ancient DNA
title_sort over a thousand years of evolutionary history of domestic geese from russian archaeological sites, analysed using ancient dna
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070935/
https://www.ncbi.nlm.nih.gov/pubmed/30037043
http://dx.doi.org/10.3390/genes9070367
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