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MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance
Monoclonal gammopathy of undetermined significance (MGUS) is a plasma cell dyscrasia that can progress to malignant multiple myeloma (MM). Specific molecular biomarkers to classify the MGUS status and discriminate the initial asymptomatic phase of MM have not been identified. We examined the serum p...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6072114/ https://www.ncbi.nlm.nih.gov/pubmed/30071092 http://dx.doi.org/10.1371/journal.pone.0201793 |
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author | Barceló, Francisca Gomila, Rosa de Paul, Ivan Gili, Xavier Segura, Jaume Pérez-Montaña, Albert Jimenez-Marco, Teresa Sampol, Antonia Portugal, José |
author_facet | Barceló, Francisca Gomila, Rosa de Paul, Ivan Gili, Xavier Segura, Jaume Pérez-Montaña, Albert Jimenez-Marco, Teresa Sampol, Antonia Portugal, José |
author_sort | Barceló, Francisca |
collection | PubMed |
description | Monoclonal gammopathy of undetermined significance (MGUS) is a plasma cell dyscrasia that can progress to malignant multiple myeloma (MM). Specific molecular biomarkers to classify the MGUS status and discriminate the initial asymptomatic phase of MM have not been identified. We examined the serum peptidome profile of MGUS patients and healthy volunteers using MALDI-TOF mass spectrometry and developed a predictive model for classifying serum samples. The predictive model was built using a support vector machine (SVM) supervised learning method tuned by applying a 20-fold cross-validation scheme. Predicting class labels in a blinded test set containing randomly selected MGUS and healthy control serum samples validated the model. The generalization performance of the predictive model was evaluated by a double cross-validation method that showed 88% average model accuracy, 89% average sensitivity and 86% average specificity. Our model, which classifies unknown serum samples as belonging to either MGUS patients or healthy individuals, can be applied to clinical diagnosis. |
format | Online Article Text |
id | pubmed-6072114 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-60721142018-08-16 MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance Barceló, Francisca Gomila, Rosa de Paul, Ivan Gili, Xavier Segura, Jaume Pérez-Montaña, Albert Jimenez-Marco, Teresa Sampol, Antonia Portugal, José PLoS One Research Article Monoclonal gammopathy of undetermined significance (MGUS) is a plasma cell dyscrasia that can progress to malignant multiple myeloma (MM). Specific molecular biomarkers to classify the MGUS status and discriminate the initial asymptomatic phase of MM have not been identified. We examined the serum peptidome profile of MGUS patients and healthy volunteers using MALDI-TOF mass spectrometry and developed a predictive model for classifying serum samples. The predictive model was built using a support vector machine (SVM) supervised learning method tuned by applying a 20-fold cross-validation scheme. Predicting class labels in a blinded test set containing randomly selected MGUS and healthy control serum samples validated the model. The generalization performance of the predictive model was evaluated by a double cross-validation method that showed 88% average model accuracy, 89% average sensitivity and 86% average specificity. Our model, which classifies unknown serum samples as belonging to either MGUS patients or healthy individuals, can be applied to clinical diagnosis. Public Library of Science 2018-08-02 /pmc/articles/PMC6072114/ /pubmed/30071092 http://dx.doi.org/10.1371/journal.pone.0201793 Text en © 2018 Barceló et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Barceló, Francisca Gomila, Rosa de Paul, Ivan Gili, Xavier Segura, Jaume Pérez-Montaña, Albert Jimenez-Marco, Teresa Sampol, Antonia Portugal, José MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance |
title | MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance |
title_full | MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance |
title_fullStr | MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance |
title_full_unstemmed | MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance |
title_short | MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance |
title_sort | maldi-tof analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6072114/ https://www.ncbi.nlm.nih.gov/pubmed/30071092 http://dx.doi.org/10.1371/journal.pone.0201793 |
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