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Screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure
Neutrophil-to-lymphocyte ratio (NLR) is commonly considered a useful prognostic index for many cardiovascular diseases; however, it has limited sensitivity and specificity. Factors associated with elevated NLR may aid in the prediction of prognosis with heart failure (HF) in combination with NLR. Th...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6072186/ https://www.ncbi.nlm.nih.gov/pubmed/29901123 http://dx.doi.org/10.3892/mmr.2018.9132 |
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author | Wan, Guoxing Ji, Lihua Xia, Wenbin Cheng, Lan Zhang, Yonggang |
author_facet | Wan, Guoxing Ji, Lihua Xia, Wenbin Cheng, Lan Zhang, Yonggang |
author_sort | Wan, Guoxing |
collection | PubMed |
description | Neutrophil-to-lymphocyte ratio (NLR) is commonly considered a useful prognostic index for many cardiovascular diseases; however, it has limited sensitivity and specificity. Factors associated with elevated NLR may aid in the prediction of prognosis with heart failure (HF) in combination with NLR. The present study sought to identify decisive factors associated with NLR in HF patients and investigate their association with elevated NLR. The gene expression profile for blood samples from 197 individuals with chronic heart failure (CHF), with corresponding hematological parameters and clinical data were obtained from the public database, GSE77343. Differentially expressed genes (DEGs) were identified, and Gene Ontology and pathway enrichment analyses were performed. The protein-protein interaction network was constructed with the Search Tool for the Retrieval of Interacting Genes along with Cytoscape. Receiver operating characteristic curves for predictive power, sensitivity and specificity were constructed. The present study identified specific associated DEGs by using Pearson linear correlation and logistic regression analysis. A mean NLR of 3.96 was determined as the cutoff value in the analysis. In total, 31 genes were initially identified as DEGs associated with elevated NLR. They were mainly enriched in neutrophil activation and neutrophil mediated immunity, in fluid shear stress and atherosclerosis, and transcriptional misregulation in cancer. Three focused DEGs, solute carrier family 22 member 4 (SLC22A4), interleukin-1 receptor 2 (IL1R2) and vanin 3 (VNN3), were finally revealed to be independently associated with elevated NLR in CHF patients. The present study demonstrated that the three genes SLC22A4, IL1R2 and VNN3 may be independently associated with elevated NLR in CHF patients as potential decisive factors of NLR. |
format | Online Article Text |
id | pubmed-6072186 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-60721862018-08-06 Screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure Wan, Guoxing Ji, Lihua Xia, Wenbin Cheng, Lan Zhang, Yonggang Mol Med Rep Articles Neutrophil-to-lymphocyte ratio (NLR) is commonly considered a useful prognostic index for many cardiovascular diseases; however, it has limited sensitivity and specificity. Factors associated with elevated NLR may aid in the prediction of prognosis with heart failure (HF) in combination with NLR. The present study sought to identify decisive factors associated with NLR in HF patients and investigate their association with elevated NLR. The gene expression profile for blood samples from 197 individuals with chronic heart failure (CHF), with corresponding hematological parameters and clinical data were obtained from the public database, GSE77343. Differentially expressed genes (DEGs) were identified, and Gene Ontology and pathway enrichment analyses were performed. The protein-protein interaction network was constructed with the Search Tool for the Retrieval of Interacting Genes along with Cytoscape. Receiver operating characteristic curves for predictive power, sensitivity and specificity were constructed. The present study identified specific associated DEGs by using Pearson linear correlation and logistic regression analysis. A mean NLR of 3.96 was determined as the cutoff value in the analysis. In total, 31 genes were initially identified as DEGs associated with elevated NLR. They were mainly enriched in neutrophil activation and neutrophil mediated immunity, in fluid shear stress and atherosclerosis, and transcriptional misregulation in cancer. Three focused DEGs, solute carrier family 22 member 4 (SLC22A4), interleukin-1 receptor 2 (IL1R2) and vanin 3 (VNN3), were finally revealed to be independently associated with elevated NLR in CHF patients. The present study demonstrated that the three genes SLC22A4, IL1R2 and VNN3 may be independently associated with elevated NLR in CHF patients as potential decisive factors of NLR. D.A. Spandidos 2018-08 2018-06-05 /pmc/articles/PMC6072186/ /pubmed/29901123 http://dx.doi.org/10.3892/mmr.2018.9132 Text en Copyright: © Wan et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Wan, Guoxing Ji, Lihua Xia, Wenbin Cheng, Lan Zhang, Yonggang Screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure |
title | Screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure |
title_full | Screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure |
title_fullStr | Screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure |
title_full_unstemmed | Screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure |
title_short | Screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure |
title_sort | screening genes associated with elevated neutrophil-to-lymphocyte ratio in chronic heart failure |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6072186/ https://www.ncbi.nlm.nih.gov/pubmed/29901123 http://dx.doi.org/10.3892/mmr.2018.9132 |
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