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An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes
Drosophila Blanks is a testes-specific RNA-binding protein required for post-meiotic spermiogenesis. However, Blanks's role in regulating RNA populations in the testes remains unknown. We performed small RNA and mRNA high-throughput sequencing in blanks mutant testes and controls. We identified...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6074722/ https://www.ncbi.nlm.nih.gov/pubmed/30094376 http://dx.doi.org/10.1016/j.heliyon.2018.e00706 |
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author | Liao, Susan E. Ai, Yiwei Fukunaga, Ryuya |
author_facet | Liao, Susan E. Ai, Yiwei Fukunaga, Ryuya |
author_sort | Liao, Susan E. |
collection | PubMed |
description | Drosophila Blanks is a testes-specific RNA-binding protein required for post-meiotic spermiogenesis. However, Blanks's role in regulating RNA populations in the testes remains unknown. We performed small RNA and mRNA high-throughput sequencing in blanks mutant testes and controls. We identified two miRNAs, one siRNA, and hundreds of mRNAs that are significantly upregulated or downregulated in blanks mutant testes. Pathway analysis revealed that differentially expressed mRNAs are involved in catabolic and metabolic processes, anion and cation transport, mating, and reproductive behavior. Our results reveal that Blanks plays important roles in defining testicular small RNA and mRNA profiles. |
format | Online Article Text |
id | pubmed-6074722 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-60747222018-08-09 An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes Liao, Susan E. Ai, Yiwei Fukunaga, Ryuya Heliyon Article Drosophila Blanks is a testes-specific RNA-binding protein required for post-meiotic spermiogenesis. However, Blanks's role in regulating RNA populations in the testes remains unknown. We performed small RNA and mRNA high-throughput sequencing in blanks mutant testes and controls. We identified two miRNAs, one siRNA, and hundreds of mRNAs that are significantly upregulated or downregulated in blanks mutant testes. Pathway analysis revealed that differentially expressed mRNAs are involved in catabolic and metabolic processes, anion and cation transport, mating, and reproductive behavior. Our results reveal that Blanks plays important roles in defining testicular small RNA and mRNA profiles. Elsevier 2018-07-25 /pmc/articles/PMC6074722/ /pubmed/30094376 http://dx.doi.org/10.1016/j.heliyon.2018.e00706 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Liao, Susan E. Ai, Yiwei Fukunaga, Ryuya An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes |
title | An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes |
title_full | An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes |
title_fullStr | An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes |
title_full_unstemmed | An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes |
title_short | An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes |
title_sort | rna-binding protein blanks plays important roles in defining small rna and mrna profiles in drosophila testes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6074722/ https://www.ncbi.nlm.nih.gov/pubmed/30094376 http://dx.doi.org/10.1016/j.heliyon.2018.e00706 |
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