Cargando…

An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes

Drosophila Blanks is a testes-specific RNA-binding protein required for post-meiotic spermiogenesis. However, Blanks's role in regulating RNA populations in the testes remains unknown. We performed small RNA and mRNA high-throughput sequencing in blanks mutant testes and controls. We identified...

Descripción completa

Detalles Bibliográficos
Autores principales: Liao, Susan E., Ai, Yiwei, Fukunaga, Ryuya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6074722/
https://www.ncbi.nlm.nih.gov/pubmed/30094376
http://dx.doi.org/10.1016/j.heliyon.2018.e00706
_version_ 1783344473697157120
author Liao, Susan E.
Ai, Yiwei
Fukunaga, Ryuya
author_facet Liao, Susan E.
Ai, Yiwei
Fukunaga, Ryuya
author_sort Liao, Susan E.
collection PubMed
description Drosophila Blanks is a testes-specific RNA-binding protein required for post-meiotic spermiogenesis. However, Blanks's role in regulating RNA populations in the testes remains unknown. We performed small RNA and mRNA high-throughput sequencing in blanks mutant testes and controls. We identified two miRNAs, one siRNA, and hundreds of mRNAs that are significantly upregulated or downregulated in blanks mutant testes. Pathway analysis revealed that differentially expressed mRNAs are involved in catabolic and metabolic processes, anion and cation transport, mating, and reproductive behavior. Our results reveal that Blanks plays important roles in defining testicular small RNA and mRNA profiles.
format Online
Article
Text
id pubmed-6074722
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-60747222018-08-09 An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes Liao, Susan E. Ai, Yiwei Fukunaga, Ryuya Heliyon Article Drosophila Blanks is a testes-specific RNA-binding protein required for post-meiotic spermiogenesis. However, Blanks's role in regulating RNA populations in the testes remains unknown. We performed small RNA and mRNA high-throughput sequencing in blanks mutant testes and controls. We identified two miRNAs, one siRNA, and hundreds of mRNAs that are significantly upregulated or downregulated in blanks mutant testes. Pathway analysis revealed that differentially expressed mRNAs are involved in catabolic and metabolic processes, anion and cation transport, mating, and reproductive behavior. Our results reveal that Blanks plays important roles in defining testicular small RNA and mRNA profiles. Elsevier 2018-07-25 /pmc/articles/PMC6074722/ /pubmed/30094376 http://dx.doi.org/10.1016/j.heliyon.2018.e00706 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Liao, Susan E.
Ai, Yiwei
Fukunaga, Ryuya
An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes
title An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes
title_full An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes
title_fullStr An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes
title_full_unstemmed An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes
title_short An RNA-binding protein Blanks plays important roles in defining small RNA and mRNA profiles in Drosophila testes
title_sort rna-binding protein blanks plays important roles in defining small rna and mrna profiles in drosophila testes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6074722/
https://www.ncbi.nlm.nih.gov/pubmed/30094376
http://dx.doi.org/10.1016/j.heliyon.2018.e00706
work_keys_str_mv AT liaosusane anrnabindingproteinblanksplaysimportantrolesindefiningsmallrnaandmrnaprofilesindrosophilatestes
AT aiyiwei anrnabindingproteinblanksplaysimportantrolesindefiningsmallrnaandmrnaprofilesindrosophilatestes
AT fukunagaryuya anrnabindingproteinblanksplaysimportantrolesindefiningsmallrnaandmrnaprofilesindrosophilatestes
AT liaosusane rnabindingproteinblanksplaysimportantrolesindefiningsmallrnaandmrnaprofilesindrosophilatestes
AT aiyiwei rnabindingproteinblanksplaysimportantrolesindefiningsmallrnaandmrnaprofilesindrosophilatestes
AT fukunagaryuya rnabindingproteinblanksplaysimportantrolesindefiningsmallrnaandmrnaprofilesindrosophilatestes