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Delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence

Inflammatory bowel disease (IBD), which comprises of Crohn's disease and ulcerative colitis, is an idiopathic relapsing and remitting disease in which the interplay of different environment, microbial, immunological and genetic factors that attribute to the progression of the disease. Numerous...

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Autores principales: Chan, Seow-Neng, Low, Eden Ngah Den, Raja Ali, Raja Affendi, Mokhtar, Norfilza Mohd
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Association for the Study of Intestinal Diseases 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6077315/
https://www.ncbi.nlm.nih.gov/pubmed/30090036
http://dx.doi.org/10.5217/ir.2018.16.3.374
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author Chan, Seow-Neng
Low, Eden Ngah Den
Raja Ali, Raja Affendi
Mokhtar, Norfilza Mohd
author_facet Chan, Seow-Neng
Low, Eden Ngah Den
Raja Ali, Raja Affendi
Mokhtar, Norfilza Mohd
author_sort Chan, Seow-Neng
collection PubMed
description Inflammatory bowel disease (IBD), which comprises of Crohn's disease and ulcerative colitis, is an idiopathic relapsing and remitting disease in which the interplay of different environment, microbial, immunological and genetic factors that attribute to the progression of the disease. Numerous studies have been conducted in multiple aspects including clinical, endoscopy and histopathology for the diagnostics and treatment of IBD. However, the molecular mechanism underlying the aetiology and pathogenesis of IBD is still poorly understood. This review tries to critically assess the scientific evidence at the transcriptomic level as it would help in the discovery of RNA molecules in tissues or serum between the healthy and diseased or different IBD subtypes. These molecular signatures could potentially serve as a reliable diagnostic or prognostic biomarker. Researchers have also embarked on the study of transcriptome to be utilized in targeted therapy. We focus on the evaluation and discussion related to the publications reporting the different approaches and techniques used in investigating the transcriptomic changes in IBD with the intention to offer new perspectives to the landscape of the disease.
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spelling pubmed-60773152018-08-08 Delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence Chan, Seow-Neng Low, Eden Ngah Den Raja Ali, Raja Affendi Mokhtar, Norfilza Mohd Intest Res Review Inflammatory bowel disease (IBD), which comprises of Crohn's disease and ulcerative colitis, is an idiopathic relapsing and remitting disease in which the interplay of different environment, microbial, immunological and genetic factors that attribute to the progression of the disease. Numerous studies have been conducted in multiple aspects including clinical, endoscopy and histopathology for the diagnostics and treatment of IBD. However, the molecular mechanism underlying the aetiology and pathogenesis of IBD is still poorly understood. This review tries to critically assess the scientific evidence at the transcriptomic level as it would help in the discovery of RNA molecules in tissues or serum between the healthy and diseased or different IBD subtypes. These molecular signatures could potentially serve as a reliable diagnostic or prognostic biomarker. Researchers have also embarked on the study of transcriptome to be utilized in targeted therapy. We focus on the evaluation and discussion related to the publications reporting the different approaches and techniques used in investigating the transcriptomic changes in IBD with the intention to offer new perspectives to the landscape of the disease. Korean Association for the Study of Intestinal Diseases 2018-07 2018-07-27 /pmc/articles/PMC6077315/ /pubmed/30090036 http://dx.doi.org/10.5217/ir.2018.16.3.374 Text en © Copyright 2018. Korean Association for the Study of Intestinal Diseases. http://creativecommons.org/licenses/by-nc/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review
Chan, Seow-Neng
Low, Eden Ngah Den
Raja Ali, Raja Affendi
Mokhtar, Norfilza Mohd
Delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence
title Delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence
title_full Delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence
title_fullStr Delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence
title_full_unstemmed Delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence
title_short Delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence
title_sort delineating inflammatory bowel disease through transcriptomic studies: current review of progress and evidence
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6077315/
https://www.ncbi.nlm.nih.gov/pubmed/30090036
http://dx.doi.org/10.5217/ir.2018.16.3.374
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