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Lesion location implemented magnetic resonance imaging radiomics for predicting IDH and TERT promoter mutations in grade II/III gliomas
Molecular biological characterization of tumors has become a pivotal procedure for glioma patient care. The aim of this study is to build conventional MRI-based radiomics model to predict genetic alterations within grade II/III gliomas attempting to implement lesion location information in the model...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6078954/ https://www.ncbi.nlm.nih.gov/pubmed/30082856 http://dx.doi.org/10.1038/s41598-018-30273-4 |
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author | Arita, Hideyuki Kinoshita, Manabu Kawaguchi, Atsushi Takahashi, Masamichi Narita, Yoshitaka Terakawa, Yuzo Tsuyuguchi, Naohiro Okita, Yoshiko Nonaka, Masahiro Moriuchi, Shusuke Takagaki, Masatoshi Fujimoto, Yasunori Fukai, Junya Izumoto, Shuichi Ishibashi, Kenichi Nakajima, Yoshikazu Shofuda, Tomoko Kanematsu, Daisuke Yoshioka, Ema Kodama, Yoshinori Mano, Masayuki Mori, Kanji Ichimura, Koichi Kanemura, Yonehiro |
author_facet | Arita, Hideyuki Kinoshita, Manabu Kawaguchi, Atsushi Takahashi, Masamichi Narita, Yoshitaka Terakawa, Yuzo Tsuyuguchi, Naohiro Okita, Yoshiko Nonaka, Masahiro Moriuchi, Shusuke Takagaki, Masatoshi Fujimoto, Yasunori Fukai, Junya Izumoto, Shuichi Ishibashi, Kenichi Nakajima, Yoshikazu Shofuda, Tomoko Kanematsu, Daisuke Yoshioka, Ema Kodama, Yoshinori Mano, Masayuki Mori, Kanji Ichimura, Koichi Kanemura, Yonehiro |
author_sort | Arita, Hideyuki |
collection | PubMed |
description | Molecular biological characterization of tumors has become a pivotal procedure for glioma patient care. The aim of this study is to build conventional MRI-based radiomics model to predict genetic alterations within grade II/III gliomas attempting to implement lesion location information in the model to improve diagnostic accuracy. One-hundred and ninety-nine grade II/III gliomas patients were enrolled. Three molecular subtypes were identified: IDH1/2-mutant, IDH1/2-mutant with TERT promoter mutation, and IDH-wild type. A total of 109 radiomics features from 169 MRI datasets and location information from 199 datasets were extracted. Prediction modeling for genetic alteration was trained via LASSO regression for 111 datasets and validated by the remaining 58 datasets. IDH mutation was detected with an accuracy of 0.82 for the training set and 0.83 for the validation set without lesion location information. Diagnostic accuracy improved to 0.85 for the training set and 0.87 for the validation set when lesion location information was implemented. Diagnostic accuracy for predicting 3 molecular subtypes of grade II/III gliomas was 0.74 for the training set and 0.56 for the validation set with lesion location information implemented. Conventional MRI-based radiomics is one of the most promising strategies that may lead to a non-invasive diagnostic technique for molecular characterization of grade II/III gliomas. |
format | Online Article Text |
id | pubmed-6078954 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-60789542018-08-09 Lesion location implemented magnetic resonance imaging radiomics for predicting IDH and TERT promoter mutations in grade II/III gliomas Arita, Hideyuki Kinoshita, Manabu Kawaguchi, Atsushi Takahashi, Masamichi Narita, Yoshitaka Terakawa, Yuzo Tsuyuguchi, Naohiro Okita, Yoshiko Nonaka, Masahiro Moriuchi, Shusuke Takagaki, Masatoshi Fujimoto, Yasunori Fukai, Junya Izumoto, Shuichi Ishibashi, Kenichi Nakajima, Yoshikazu Shofuda, Tomoko Kanematsu, Daisuke Yoshioka, Ema Kodama, Yoshinori Mano, Masayuki Mori, Kanji Ichimura, Koichi Kanemura, Yonehiro Sci Rep Article Molecular biological characterization of tumors has become a pivotal procedure for glioma patient care. The aim of this study is to build conventional MRI-based radiomics model to predict genetic alterations within grade II/III gliomas attempting to implement lesion location information in the model to improve diagnostic accuracy. One-hundred and ninety-nine grade II/III gliomas patients were enrolled. Three molecular subtypes were identified: IDH1/2-mutant, IDH1/2-mutant with TERT promoter mutation, and IDH-wild type. A total of 109 radiomics features from 169 MRI datasets and location information from 199 datasets were extracted. Prediction modeling for genetic alteration was trained via LASSO regression for 111 datasets and validated by the remaining 58 datasets. IDH mutation was detected with an accuracy of 0.82 for the training set and 0.83 for the validation set without lesion location information. Diagnostic accuracy improved to 0.85 for the training set and 0.87 for the validation set when lesion location information was implemented. Diagnostic accuracy for predicting 3 molecular subtypes of grade II/III gliomas was 0.74 for the training set and 0.56 for the validation set with lesion location information implemented. Conventional MRI-based radiomics is one of the most promising strategies that may lead to a non-invasive diagnostic technique for molecular characterization of grade II/III gliomas. Nature Publishing Group UK 2018-08-06 /pmc/articles/PMC6078954/ /pubmed/30082856 http://dx.doi.org/10.1038/s41598-018-30273-4 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Arita, Hideyuki Kinoshita, Manabu Kawaguchi, Atsushi Takahashi, Masamichi Narita, Yoshitaka Terakawa, Yuzo Tsuyuguchi, Naohiro Okita, Yoshiko Nonaka, Masahiro Moriuchi, Shusuke Takagaki, Masatoshi Fujimoto, Yasunori Fukai, Junya Izumoto, Shuichi Ishibashi, Kenichi Nakajima, Yoshikazu Shofuda, Tomoko Kanematsu, Daisuke Yoshioka, Ema Kodama, Yoshinori Mano, Masayuki Mori, Kanji Ichimura, Koichi Kanemura, Yonehiro Lesion location implemented magnetic resonance imaging radiomics for predicting IDH and TERT promoter mutations in grade II/III gliomas |
title | Lesion location implemented magnetic resonance imaging radiomics for predicting IDH and TERT promoter mutations in grade II/III gliomas |
title_full | Lesion location implemented magnetic resonance imaging radiomics for predicting IDH and TERT promoter mutations in grade II/III gliomas |
title_fullStr | Lesion location implemented magnetic resonance imaging radiomics for predicting IDH and TERT promoter mutations in grade II/III gliomas |
title_full_unstemmed | Lesion location implemented magnetic resonance imaging radiomics for predicting IDH and TERT promoter mutations in grade II/III gliomas |
title_short | Lesion location implemented magnetic resonance imaging radiomics for predicting IDH and TERT promoter mutations in grade II/III gliomas |
title_sort | lesion location implemented magnetic resonance imaging radiomics for predicting idh and tert promoter mutations in grade ii/iii gliomas |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6078954/ https://www.ncbi.nlm.nih.gov/pubmed/30082856 http://dx.doi.org/10.1038/s41598-018-30273-4 |
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