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Prediction of Acute Kidney Injury With a Machine Learning Algorithm Using Electronic Health Record Data
BACKGROUND: A major problem in treating acute kidney injury (AKI) is that clinical criteria for recognition are markers of established kidney damage or impaired function; treatment before such damage manifests is desirable. Clinicians could intervene during what may be a crucial stage for preventing...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6080076/ https://www.ncbi.nlm.nih.gov/pubmed/30094049 http://dx.doi.org/10.1177/2054358118776326 |
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author | Mohamadlou, Hamid Lynn-Palevsky, Anna Barton, Christopher Chettipally, Uli Shieh, Lisa Calvert, Jacob Saber, Nicholas R. Das, Ritankar |
author_facet | Mohamadlou, Hamid Lynn-Palevsky, Anna Barton, Christopher Chettipally, Uli Shieh, Lisa Calvert, Jacob Saber, Nicholas R. Das, Ritankar |
author_sort | Mohamadlou, Hamid |
collection | PubMed |
description | BACKGROUND: A major problem in treating acute kidney injury (AKI) is that clinical criteria for recognition are markers of established kidney damage or impaired function; treatment before such damage manifests is desirable. Clinicians could intervene during what may be a crucial stage for preventing permanent kidney injury if patients with incipient AKI and those at high risk of developing AKI could be identified. OBJECTIVE: In this study, we evaluate a machine learning algorithm for early detection and prediction of AKI. DESIGN: We used a machine learning technique, boosted ensembles of decision trees, to train an AKI prediction tool on retrospective data taken from more than 300 000 inpatient encounters. SETTING: Data were collected from inpatient wards at Stanford Medical Center and intensive care unit patients at Beth Israel Deaconess Medical Center. PATIENTS: Patients older than the age of 18 whose hospital stays lasted between 5 and 1000 hours and who had at least one documented measurement of heart rate, respiratory rate, temperature, serum creatinine (SCr), and Glasgow Coma Scale (GCS). MEASUREMENTS: We tested the algorithm’s ability to detect AKI at onset and to predict AKI 12, 24, 48, and 72 hours before onset. METHODS: We tested AKI detection and prediction using the National Health Service (NHS) England AKI Algorithm as a gold standard. We additionally tested the algorithm’s ability to detect AKI as defined by the Kidney Disease: Improving Global Outcomes (KDIGO) guidelines. We compared the algorithm’s 3-fold cross-validation performance to the Sequential Organ Failure Assessment (SOFA) score for AKI identification in terms of area under the receiver operating characteristic (AUROC). RESULTS: The algorithm demonstrated high AUROC for detecting and predicting NHS-defined AKI at all tested time points. The algorithm achieves AUROC of 0.872 (95% confidence interval [CI], 0.867-0.878) for AKI detection at time of onset. For prediction 12 hours before onset, the algorithm achieves an AUROC of 0.800 (95% CI, 0.792-0.809). For 24-hour predictions, the algorithm achieves AUROC of 0.795 (95% CI, 0.785-0.804). For 48-hour and 72-hour predictions, the algorithm achieves AUROC values of 0.761 (95% CI, 0.753-0.768) and 0.728 (95% CI, 0.719-0.737), respectively. LIMITATIONS: Because of the retrospective nature of this study, we cannot draw any conclusions about the impact the algorithm’s predictions will have on patient outcomes in a clinical setting. CONCLUSIONS: The results of these experiments suggest that a machine learning–based AKI prediction tool may offer important prognostic capabilities for determining which patients are likely to suffer AKI, potentially allowing clinicians to intervene before kidney damage manifests. |
format | Online Article Text |
id | pubmed-6080076 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-60800762018-08-09 Prediction of Acute Kidney Injury With a Machine Learning Algorithm Using Electronic Health Record Data Mohamadlou, Hamid Lynn-Palevsky, Anna Barton, Christopher Chettipally, Uli Shieh, Lisa Calvert, Jacob Saber, Nicholas R. Das, Ritankar Can J Kidney Health Dis Original Research Article BACKGROUND: A major problem in treating acute kidney injury (AKI) is that clinical criteria for recognition are markers of established kidney damage or impaired function; treatment before such damage manifests is desirable. Clinicians could intervene during what may be a crucial stage for preventing permanent kidney injury if patients with incipient AKI and those at high risk of developing AKI could be identified. OBJECTIVE: In this study, we evaluate a machine learning algorithm for early detection and prediction of AKI. DESIGN: We used a machine learning technique, boosted ensembles of decision trees, to train an AKI prediction tool on retrospective data taken from more than 300 000 inpatient encounters. SETTING: Data were collected from inpatient wards at Stanford Medical Center and intensive care unit patients at Beth Israel Deaconess Medical Center. PATIENTS: Patients older than the age of 18 whose hospital stays lasted between 5 and 1000 hours and who had at least one documented measurement of heart rate, respiratory rate, temperature, serum creatinine (SCr), and Glasgow Coma Scale (GCS). MEASUREMENTS: We tested the algorithm’s ability to detect AKI at onset and to predict AKI 12, 24, 48, and 72 hours before onset. METHODS: We tested AKI detection and prediction using the National Health Service (NHS) England AKI Algorithm as a gold standard. We additionally tested the algorithm’s ability to detect AKI as defined by the Kidney Disease: Improving Global Outcomes (KDIGO) guidelines. We compared the algorithm’s 3-fold cross-validation performance to the Sequential Organ Failure Assessment (SOFA) score for AKI identification in terms of area under the receiver operating characteristic (AUROC). RESULTS: The algorithm demonstrated high AUROC for detecting and predicting NHS-defined AKI at all tested time points. The algorithm achieves AUROC of 0.872 (95% confidence interval [CI], 0.867-0.878) for AKI detection at time of onset. For prediction 12 hours before onset, the algorithm achieves an AUROC of 0.800 (95% CI, 0.792-0.809). For 24-hour predictions, the algorithm achieves AUROC of 0.795 (95% CI, 0.785-0.804). For 48-hour and 72-hour predictions, the algorithm achieves AUROC values of 0.761 (95% CI, 0.753-0.768) and 0.728 (95% CI, 0.719-0.737), respectively. LIMITATIONS: Because of the retrospective nature of this study, we cannot draw any conclusions about the impact the algorithm’s predictions will have on patient outcomes in a clinical setting. CONCLUSIONS: The results of these experiments suggest that a machine learning–based AKI prediction tool may offer important prognostic capabilities for determining which patients are likely to suffer AKI, potentially allowing clinicians to intervene before kidney damage manifests. SAGE Publications 2018-06-08 /pmc/articles/PMC6080076/ /pubmed/30094049 http://dx.doi.org/10.1177/2054358118776326 Text en © The Author(s) 2018 http://www.creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Article Mohamadlou, Hamid Lynn-Palevsky, Anna Barton, Christopher Chettipally, Uli Shieh, Lisa Calvert, Jacob Saber, Nicholas R. Das, Ritankar Prediction of Acute Kidney Injury With a Machine Learning Algorithm Using Electronic Health Record Data |
title | Prediction of Acute Kidney Injury With a Machine Learning Algorithm
Using Electronic Health Record Data |
title_full | Prediction of Acute Kidney Injury With a Machine Learning Algorithm
Using Electronic Health Record Data |
title_fullStr | Prediction of Acute Kidney Injury With a Machine Learning Algorithm
Using Electronic Health Record Data |
title_full_unstemmed | Prediction of Acute Kidney Injury With a Machine Learning Algorithm
Using Electronic Health Record Data |
title_short | Prediction of Acute Kidney Injury With a Machine Learning Algorithm
Using Electronic Health Record Data |
title_sort | prediction of acute kidney injury with a machine learning algorithm
using electronic health record data |
topic | Original Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6080076/ https://www.ncbi.nlm.nih.gov/pubmed/30094049 http://dx.doi.org/10.1177/2054358118776326 |
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