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Development of heme protein based oxygen sensing indicators
Oxygen is essential for aerobic life and is required for various oxygen-dependent biochemical reactions. In addition, oxygen plays important roles in multiple intracellular signaling pathways. Thus, to investigate oxygen homeostasis in living cells, we developed a genetically encoded oxygen sensor p...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6081431/ https://www.ncbi.nlm.nih.gov/pubmed/30087408 http://dx.doi.org/10.1038/s41598-018-30329-5 |
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author | Nomata, Jiro Hisabori, Toru |
author_facet | Nomata, Jiro Hisabori, Toru |
author_sort | Nomata, Jiro |
collection | PubMed |
description | Oxygen is essential for aerobic life and is required for various oxygen-dependent biochemical reactions. In addition, oxygen plays important roles in multiple intracellular signaling pathways. Thus, to investigate oxygen homeostasis in living cells, we developed a genetically encoded oxygen sensor protein using the oxygen sensor domain of bacterial phosphodiesterase direct oxygen sensor protein (DosP), which was connected to yellow fluorescence protein (YFP) using an optimized antiparallel coiled-coil linker. The resulting ANA-Y (Anaerobic/aerobic sensing yellow fluorescence protein) was highly sensitive to oxygen and had a half saturation concentration of 18 μM. The ANA-Y reacts with dissolved oxygen within 10 s and the resulting increases in fluorescence are reversed with decreases in oxygen concentrations. This sensitivity of the ANA-Y enabled direct determinations of initial photosynthetic oxygen production by cyanobacteria. ANA-Y exhibits reversible fluorescence change of donor YFP following reversible absorbance change of acceptor DosH, and the operating mechanism of this ANA-Y could be used to develop various protein sensor probes for intracellular signaling molecules using natural sensor proteins. |
format | Online Article Text |
id | pubmed-6081431 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-60814312018-08-10 Development of heme protein based oxygen sensing indicators Nomata, Jiro Hisabori, Toru Sci Rep Article Oxygen is essential for aerobic life and is required for various oxygen-dependent biochemical reactions. In addition, oxygen plays important roles in multiple intracellular signaling pathways. Thus, to investigate oxygen homeostasis in living cells, we developed a genetically encoded oxygen sensor protein using the oxygen sensor domain of bacterial phosphodiesterase direct oxygen sensor protein (DosP), which was connected to yellow fluorescence protein (YFP) using an optimized antiparallel coiled-coil linker. The resulting ANA-Y (Anaerobic/aerobic sensing yellow fluorescence protein) was highly sensitive to oxygen and had a half saturation concentration of 18 μM. The ANA-Y reacts with dissolved oxygen within 10 s and the resulting increases in fluorescence are reversed with decreases in oxygen concentrations. This sensitivity of the ANA-Y enabled direct determinations of initial photosynthetic oxygen production by cyanobacteria. ANA-Y exhibits reversible fluorescence change of donor YFP following reversible absorbance change of acceptor DosH, and the operating mechanism of this ANA-Y could be used to develop various protein sensor probes for intracellular signaling molecules using natural sensor proteins. Nature Publishing Group UK 2018-08-07 /pmc/articles/PMC6081431/ /pubmed/30087408 http://dx.doi.org/10.1038/s41598-018-30329-5 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Nomata, Jiro Hisabori, Toru Development of heme protein based oxygen sensing indicators |
title | Development of heme protein based oxygen sensing indicators |
title_full | Development of heme protein based oxygen sensing indicators |
title_fullStr | Development of heme protein based oxygen sensing indicators |
title_full_unstemmed | Development of heme protein based oxygen sensing indicators |
title_short | Development of heme protein based oxygen sensing indicators |
title_sort | development of heme protein based oxygen sensing indicators |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6081431/ https://www.ncbi.nlm.nih.gov/pubmed/30087408 http://dx.doi.org/10.1038/s41598-018-30329-5 |
work_keys_str_mv | AT nomatajiro developmentofhemeproteinbasedoxygensensingindicators AT hisaboritoru developmentofhemeproteinbasedoxygensensingindicators |