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ONETOOL for the analysis of family-based big data

MOTIVATION: Despite the need for separate tools to analyze family-based data, there are only a handful of tools optimized for family-based big data compared to the number of tools available for analyzing population-based data. RESULTS: ONETOOL implements the properties of well-known existing family...

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Detalles Bibliográficos
Autores principales: Song, Yeunjoo E, Lee, Sungyoung, Park, Kyungtaek, Elston, Robert C, Yang, Hyeon-Jong, Won, Sungho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6084591/
https://www.ncbi.nlm.nih.gov/pubmed/29596615
http://dx.doi.org/10.1093/bioinformatics/bty180
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author Song, Yeunjoo E
Lee, Sungyoung
Park, Kyungtaek
Elston, Robert C
Yang, Hyeon-Jong
Won, Sungho
author_facet Song, Yeunjoo E
Lee, Sungyoung
Park, Kyungtaek
Elston, Robert C
Yang, Hyeon-Jong
Won, Sungho
author_sort Song, Yeunjoo E
collection PubMed
description MOTIVATION: Despite the need for separate tools to analyze family-based data, there are only a handful of tools optimized for family-based big data compared to the number of tools available for analyzing population-based data. RESULTS: ONETOOL implements the properties of well-known existing family data analysis tools and recently developed methods in a computationally efficient manner, and so is suitable for analyzing the vast amount of variant data available from sequencing family members, providing a rich choice of analysis methods for big data on families. AVAILABILITY AND IMPLEMENTATION: ONETOOL is freely available from http://healthstat.snu.ac.kr/software/onetool/. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
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spelling pubmed-60845912018-08-14 ONETOOL for the analysis of family-based big data Song, Yeunjoo E Lee, Sungyoung Park, Kyungtaek Elston, Robert C Yang, Hyeon-Jong Won, Sungho Bioinformatics Applications Notes MOTIVATION: Despite the need for separate tools to analyze family-based data, there are only a handful of tools optimized for family-based big data compared to the number of tools available for analyzing population-based data. RESULTS: ONETOOL implements the properties of well-known existing family data analysis tools and recently developed methods in a computationally efficient manner, and so is suitable for analyzing the vast amount of variant data available from sequencing family members, providing a rich choice of analysis methods for big data on families. AVAILABILITY AND IMPLEMENTATION: ONETOOL is freely available from http://healthstat.snu.ac.kr/software/onetool/. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Oxford University Press 2018-08-15 2018-03-27 /pmc/articles/PMC6084591/ /pubmed/29596615 http://dx.doi.org/10.1093/bioinformatics/bty180 Text en © The Author(s) 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Applications Notes
Song, Yeunjoo E
Lee, Sungyoung
Park, Kyungtaek
Elston, Robert C
Yang, Hyeon-Jong
Won, Sungho
ONETOOL for the analysis of family-based big data
title ONETOOL for the analysis of family-based big data
title_full ONETOOL for the analysis of family-based big data
title_fullStr ONETOOL for the analysis of family-based big data
title_full_unstemmed ONETOOL for the analysis of family-based big data
title_short ONETOOL for the analysis of family-based big data
title_sort onetool for the analysis of family-based big data
topic Applications Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6084591/
https://www.ncbi.nlm.nih.gov/pubmed/29596615
http://dx.doi.org/10.1093/bioinformatics/bty180
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