Cargando…

High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females

BACKGROUND: Like glucose-6-phosphate dehydrogenase (G6PD) deficient hemizygous males and homozygous females, heterozygous females could also manifest hemolytic crisis, neonatal hyperbilirubinemia or kernicterus upon exposure to oxidative stress induced by certain foods such as fava beans, drugs or i...

Descripción completa

Detalles Bibliográficos
Autores principales: Islam, Md Tarikul, Sarker, Suprovath Kumar, Talukder, Shezote, Bhuyan, Golam Sarower, Rahat, Asifuzzaman, Islam, Nafisa Nawal, Mahmud, Hasan, Hossain, Mohammad Amir, Muraduzzaman, A. K. M., Rahman, Jakia, Qadri, Syeda Kashfi, Shahidullah, Mohammod, Mannan, Mohammad Abdul, Tahura, Sarabon, Hussain, Manzoor, Saha, Narayan, Akhter, Shahida, Nahar, Nazmun, Begum, Firoza, Shirin, Tahmina, Akhteruzzaman, Sharif, Qadri, Syed Saleheen, Qadri, Firdausi, Mannoor, Kaiissar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6086071/
https://www.ncbi.nlm.nih.gov/pubmed/30097005
http://dx.doi.org/10.1186/s12863-018-0664-1
_version_ 1783346453530279936
author Islam, Md Tarikul
Sarker, Suprovath Kumar
Talukder, Shezote
Bhuyan, Golam Sarower
Rahat, Asifuzzaman
Islam, Nafisa Nawal
Mahmud, Hasan
Hossain, Mohammad Amir
Muraduzzaman, A. K. M.
Rahman, Jakia
Qadri, Syeda Kashfi
Shahidullah, Mohammod
Mannan, Mohammad Abdul
Tahura, Sarabon
Hussain, Manzoor
Saha, Narayan
Akhter, Shahida
Nahar, Nazmun
Begum, Firoza
Shirin, Tahmina
Akhteruzzaman, Sharif
Qadri, Syed Saleheen
Qadri, Firdausi
Mannoor, Kaiissar
author_facet Islam, Md Tarikul
Sarker, Suprovath Kumar
Talukder, Shezote
Bhuyan, Golam Sarower
Rahat, Asifuzzaman
Islam, Nafisa Nawal
Mahmud, Hasan
Hossain, Mohammad Amir
Muraduzzaman, A. K. M.
Rahman, Jakia
Qadri, Syeda Kashfi
Shahidullah, Mohammod
Mannan, Mohammad Abdul
Tahura, Sarabon
Hussain, Manzoor
Saha, Narayan
Akhter, Shahida
Nahar, Nazmun
Begum, Firoza
Shirin, Tahmina
Akhteruzzaman, Sharif
Qadri, Syed Saleheen
Qadri, Firdausi
Mannoor, Kaiissar
author_sort Islam, Md Tarikul
collection PubMed
description BACKGROUND: Like glucose-6-phosphate dehydrogenase (G6PD) deficient hemizygous males and homozygous females, heterozygous females could also manifest hemolytic crisis, neonatal hyperbilirubinemia or kernicterus upon exposure to oxidative stress induced by certain foods such as fava beans, drugs or infections. Although hemizygous males and homozygous females are easily detected by conventional G6PD enzyme assay method, the heterozygous state could be missed by the conventional methods as the mosaic population of both normal and deficient RBCs circulates in the blood. Thus the present study aimed to apply high resolution melting (HRM) curve analysis approach to see whether HRM could be used as a supplemental approach to increase the chance of detection of G6PD heterozygosity. RESULTS: Sixty-three clinically suspected females were evaluated for G6PD status using both enzyme assay and HRM analysis. Four out of sixty-three participants came out as G6PD deficient by the enzyme assay method, whereas HRM approach could identify nine participants with G6PD variants, one homozygous and eight heterozygous. Although only three out of eight heterozygous samples had G6PD enzyme deficiency, the HRM-based heterozygous G6PD variants detection for the rest of the samples with normal G6PD enzyme activities could have significance because their newborns might fall victim to serious consequences under certain oxidative stress. CONCLUSIONS: In addition to the G6PD enzyme assay, HRM curve analysis could be useful as a supplemental approach for detection of G6PD heterozygosity.
format Online
Article
Text
id pubmed-6086071
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-60860712018-08-16 High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females Islam, Md Tarikul Sarker, Suprovath Kumar Talukder, Shezote Bhuyan, Golam Sarower Rahat, Asifuzzaman Islam, Nafisa Nawal Mahmud, Hasan Hossain, Mohammad Amir Muraduzzaman, A. K. M. Rahman, Jakia Qadri, Syeda Kashfi Shahidullah, Mohammod Mannan, Mohammad Abdul Tahura, Sarabon Hussain, Manzoor Saha, Narayan Akhter, Shahida Nahar, Nazmun Begum, Firoza Shirin, Tahmina Akhteruzzaman, Sharif Qadri, Syed Saleheen Qadri, Firdausi Mannoor, Kaiissar BMC Genet Methodology Article BACKGROUND: Like glucose-6-phosphate dehydrogenase (G6PD) deficient hemizygous males and homozygous females, heterozygous females could also manifest hemolytic crisis, neonatal hyperbilirubinemia or kernicterus upon exposure to oxidative stress induced by certain foods such as fava beans, drugs or infections. Although hemizygous males and homozygous females are easily detected by conventional G6PD enzyme assay method, the heterozygous state could be missed by the conventional methods as the mosaic population of both normal and deficient RBCs circulates in the blood. Thus the present study aimed to apply high resolution melting (HRM) curve analysis approach to see whether HRM could be used as a supplemental approach to increase the chance of detection of G6PD heterozygosity. RESULTS: Sixty-three clinically suspected females were evaluated for G6PD status using both enzyme assay and HRM analysis. Four out of sixty-three participants came out as G6PD deficient by the enzyme assay method, whereas HRM approach could identify nine participants with G6PD variants, one homozygous and eight heterozygous. Although only three out of eight heterozygous samples had G6PD enzyme deficiency, the HRM-based heterozygous G6PD variants detection for the rest of the samples with normal G6PD enzyme activities could have significance because their newborns might fall victim to serious consequences under certain oxidative stress. CONCLUSIONS: In addition to the G6PD enzyme assay, HRM curve analysis could be useful as a supplemental approach for detection of G6PD heterozygosity. BioMed Central 2018-08-10 /pmc/articles/PMC6086071/ /pubmed/30097005 http://dx.doi.org/10.1186/s12863-018-0664-1 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology Article
Islam, Md Tarikul
Sarker, Suprovath Kumar
Talukder, Shezote
Bhuyan, Golam Sarower
Rahat, Asifuzzaman
Islam, Nafisa Nawal
Mahmud, Hasan
Hossain, Mohammad Amir
Muraduzzaman, A. K. M.
Rahman, Jakia
Qadri, Syeda Kashfi
Shahidullah, Mohammod
Mannan, Mohammad Abdul
Tahura, Sarabon
Hussain, Manzoor
Saha, Narayan
Akhter, Shahida
Nahar, Nazmun
Begum, Firoza
Shirin, Tahmina
Akhteruzzaman, Sharif
Qadri, Syed Saleheen
Qadri, Firdausi
Mannoor, Kaiissar
High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females
title High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females
title_full High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females
title_fullStr High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females
title_full_unstemmed High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females
title_short High resolution melting curve analysis enables rapid and reliable detection of G6PD variants in heterozygous females
title_sort high resolution melting curve analysis enables rapid and reliable detection of g6pd variants in heterozygous females
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6086071/
https://www.ncbi.nlm.nih.gov/pubmed/30097005
http://dx.doi.org/10.1186/s12863-018-0664-1
work_keys_str_mv AT islammdtarikul highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT sarkersuprovathkumar highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT talukdershezote highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT bhuyangolamsarower highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT rahatasifuzzaman highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT islamnafisanawal highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT mahmudhasan highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT hossainmohammadamir highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT muraduzzamanakm highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT rahmanjakia highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT qadrisyedakashfi highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT shahidullahmohammod highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT mannanmohammadabdul highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT tahurasarabon highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT hussainmanzoor highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT sahanarayan highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT akhtershahida highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT naharnazmun highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT begumfiroza highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT shirintahmina highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT akhteruzzamansharif highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT qadrisyedsaleheen highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT qadrifirdausi highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales
AT mannoorkaiissar highresolutionmeltingcurveanalysisenablesrapidandreliabledetectionofg6pdvariantsinheterozygousfemales