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On detection of periodicity in C-reactive protein (CRP) levels

C-reactive protein (CRP) is an acute-phase plasma protein that can be used as a biomarker for activation of the immune system. A spectral analysis of CRP level over time for patients with gynaecological tumours has been reported by Madondo et al., using a periodogram method, suggesting that there is...

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Autores principales: Dorraki, Mohsen, Fouladzadeh, Anahita, Salamon, Stephen J., Allison, Andrew, Coventry, Brendon J., Abbott, Derek
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6086826/
https://www.ncbi.nlm.nih.gov/pubmed/30097610
http://dx.doi.org/10.1038/s41598-018-30469-8
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author Dorraki, Mohsen
Fouladzadeh, Anahita
Salamon, Stephen J.
Allison, Andrew
Coventry, Brendon J.
Abbott, Derek
author_facet Dorraki, Mohsen
Fouladzadeh, Anahita
Salamon, Stephen J.
Allison, Andrew
Coventry, Brendon J.
Abbott, Derek
author_sort Dorraki, Mohsen
collection PubMed
description C-reactive protein (CRP) is an acute-phase plasma protein that can be used as a biomarker for activation of the immune system. A spectral analysis of CRP level over time for patients with gynaecological tumours has been reported by Madondo et al., using a periodogram method, suggesting that there is no significant periodicity in the data. In our study, we investigate the impact of low sample number on periodogram analysis, for non-uniform sampling intervals—we conclude that data of Madondo et al. cannot rule out periodic behaviour. The search for patterns (periodic or otherwise) in the CRP time-series is of interest for providing a cue for the optimal times at which cancer therapies are best administered. In this paper we show (i) there is no evidence to rule out periodicity in CRP levels, and (ii) we provide a prescription for the minimum data sample rate required in future experiments for improved testing of a periodic CRP signal hypothesis. The analysis we provide may be used for establishing periodicity in any short time-series signal that is observed without a priori information.
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spelling pubmed-60868262018-08-16 On detection of periodicity in C-reactive protein (CRP) levels Dorraki, Mohsen Fouladzadeh, Anahita Salamon, Stephen J. Allison, Andrew Coventry, Brendon J. Abbott, Derek Sci Rep Article C-reactive protein (CRP) is an acute-phase plasma protein that can be used as a biomarker for activation of the immune system. A spectral analysis of CRP level over time for patients with gynaecological tumours has been reported by Madondo et al., using a periodogram method, suggesting that there is no significant periodicity in the data. In our study, we investigate the impact of low sample number on periodogram analysis, for non-uniform sampling intervals—we conclude that data of Madondo et al. cannot rule out periodic behaviour. The search for patterns (periodic or otherwise) in the CRP time-series is of interest for providing a cue for the optimal times at which cancer therapies are best administered. In this paper we show (i) there is no evidence to rule out periodicity in CRP levels, and (ii) we provide a prescription for the minimum data sample rate required in future experiments for improved testing of a periodic CRP signal hypothesis. The analysis we provide may be used for establishing periodicity in any short time-series signal that is observed without a priori information. Nature Publishing Group UK 2018-08-10 /pmc/articles/PMC6086826/ /pubmed/30097610 http://dx.doi.org/10.1038/s41598-018-30469-8 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Dorraki, Mohsen
Fouladzadeh, Anahita
Salamon, Stephen J.
Allison, Andrew
Coventry, Brendon J.
Abbott, Derek
On detection of periodicity in C-reactive protein (CRP) levels
title On detection of periodicity in C-reactive protein (CRP) levels
title_full On detection of periodicity in C-reactive protein (CRP) levels
title_fullStr On detection of periodicity in C-reactive protein (CRP) levels
title_full_unstemmed On detection of periodicity in C-reactive protein (CRP) levels
title_short On detection of periodicity in C-reactive protein (CRP) levels
title_sort on detection of periodicity in c-reactive protein (crp) levels
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6086826/
https://www.ncbi.nlm.nih.gov/pubmed/30097610
http://dx.doi.org/10.1038/s41598-018-30469-8
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