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Survival analysis in Caucasian pulmonary adenocarcinoma patients based on differential targets between Caucasian and Asian population
Ethnicity differences may contribute to the variety of overall survival in pulmonary adenocarcinoma, while the influence of ethnicity relevant somatic driver mutations (ERSDM) profile on Caucasian survival is not well investigated. In this study, we studied epidermal growth factor receptor (EGFR), t...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6088109/ https://www.ncbi.nlm.nih.gov/pubmed/30108455 http://dx.doi.org/10.1016/j.sjbs.2018.05.023 |
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author | Zhu, Zheng Liang, Zhigang Tong, Jichun Mao, Xiaoliang Yin, Yajun Manor, Lydia C. Shen, Zhenya |
author_facet | Zhu, Zheng Liang, Zhigang Tong, Jichun Mao, Xiaoliang Yin, Yajun Manor, Lydia C. Shen, Zhenya |
author_sort | Zhu, Zheng |
collection | PubMed |
description | Ethnicity differences may contribute to the variety of overall survival in pulmonary adenocarcinoma, while the influence of ethnicity relevant somatic driver mutations (ERSDM) profile on Caucasian survival is not well investigated. In this study, we studied epidermal growth factor receptor (EGFR), tumor protein p53 (TP53), Kirsten rat sarcoma 2 viral oncogene homolog (KRAS), and Serine/Threonine Kinase 11 (STK11) to construct the ERSDM profile. Those genes were selected as harboring somatic driver mutations with >10% prevalence and with different occurrence between Caucasian and Asian ethnicity. Clinical information and transcriptome sequencing of 173 Caucasian pulmonary adenocarcinoma patients with matched mutation data are retrieved from TCGA, Kaplan-Meier analyses and Cox proportional-hazards regression models are further used to analyze the effect of the ERSDM profile on overall survival. There is no significant correlation between single gene mutation and overall survival, while patients with less than two mutated genes have a better overall survival compared with those with at least two mutated genes (p = 0.034). All of these indicate that multiple mutations in the ERSDM profile may be a negative prognostic factor for overall survival in Caucasian pulmonary adenocarcinoma patients. |
format | Online Article Text |
id | pubmed-6088109 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-60881092018-08-14 Survival analysis in Caucasian pulmonary adenocarcinoma patients based on differential targets between Caucasian and Asian population Zhu, Zheng Liang, Zhigang Tong, Jichun Mao, Xiaoliang Yin, Yajun Manor, Lydia C. Shen, Zhenya Saudi J Biol Sci Article Ethnicity differences may contribute to the variety of overall survival in pulmonary adenocarcinoma, while the influence of ethnicity relevant somatic driver mutations (ERSDM) profile on Caucasian survival is not well investigated. In this study, we studied epidermal growth factor receptor (EGFR), tumor protein p53 (TP53), Kirsten rat sarcoma 2 viral oncogene homolog (KRAS), and Serine/Threonine Kinase 11 (STK11) to construct the ERSDM profile. Those genes were selected as harboring somatic driver mutations with >10% prevalence and with different occurrence between Caucasian and Asian ethnicity. Clinical information and transcriptome sequencing of 173 Caucasian pulmonary adenocarcinoma patients with matched mutation data are retrieved from TCGA, Kaplan-Meier analyses and Cox proportional-hazards regression models are further used to analyze the effect of the ERSDM profile on overall survival. There is no significant correlation between single gene mutation and overall survival, while patients with less than two mutated genes have a better overall survival compared with those with at least two mutated genes (p = 0.034). All of these indicate that multiple mutations in the ERSDM profile may be a negative prognostic factor for overall survival in Caucasian pulmonary adenocarcinoma patients. Elsevier 2018-07 2018-05-22 /pmc/articles/PMC6088109/ /pubmed/30108455 http://dx.doi.org/10.1016/j.sjbs.2018.05.023 Text en © 2018 Production and hosting by Elsevier B.V. on behalf of King Saud University. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Zhu, Zheng Liang, Zhigang Tong, Jichun Mao, Xiaoliang Yin, Yajun Manor, Lydia C. Shen, Zhenya Survival analysis in Caucasian pulmonary adenocarcinoma patients based on differential targets between Caucasian and Asian population |
title | Survival analysis in Caucasian pulmonary adenocarcinoma patients based on differential targets between Caucasian and Asian population |
title_full | Survival analysis in Caucasian pulmonary adenocarcinoma patients based on differential targets between Caucasian and Asian population |
title_fullStr | Survival analysis in Caucasian pulmonary adenocarcinoma patients based on differential targets between Caucasian and Asian population |
title_full_unstemmed | Survival analysis in Caucasian pulmonary adenocarcinoma patients based on differential targets between Caucasian and Asian population |
title_short | Survival analysis in Caucasian pulmonary adenocarcinoma patients based on differential targets between Caucasian and Asian population |
title_sort | survival analysis in caucasian pulmonary adenocarcinoma patients based on differential targets between caucasian and asian population |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6088109/ https://www.ncbi.nlm.nih.gov/pubmed/30108455 http://dx.doi.org/10.1016/j.sjbs.2018.05.023 |
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