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Herpes ICP8 protein stimulates homologous recombination in human cells

Recombineering has transformed functional genomic analysis. Genome modification by recombineering using the phage lambda Red homologous recombination protein Beta in Escherichia coli has approached 100% efficiency. While highly efficient in E. coli, recombineering using the Red Synaptase/Exonuclease...

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Autores principales: Valledor, Melvys, Myers, Richard S., Schiller, Paul C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6093641/
https://www.ncbi.nlm.nih.gov/pubmed/30110337
http://dx.doi.org/10.1371/journal.pone.0200955
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author Valledor, Melvys
Myers, Richard S.
Schiller, Paul C.
author_facet Valledor, Melvys
Myers, Richard S.
Schiller, Paul C.
author_sort Valledor, Melvys
collection PubMed
description Recombineering has transformed functional genomic analysis. Genome modification by recombineering using the phage lambda Red homologous recombination protein Beta in Escherichia coli has approached 100% efficiency. While highly efficient in E. coli, recombineering using the Red Synaptase/Exonuclease pair (SynExo) in other organisms declines in efficiency roughly correlating with phylogenetic distance from E. coli. SynExo recombinases are common to double-stranded DNA viruses infecting a variety of organisms, including humans. Human Herpes virus 1 (HHV1) encodes a SynExo comprised of ICP8 synaptase and UL12 exonuclease. In a previous study, the Herpes SynExo was reconstituted in vitro and shown to catalyze a model recombination reaction. Here we describe stimulation of gene targeting to edit a novel fluorescent protein gene in the human genome using ICP8 and compared its efficiency to that of a “humanized” version of Beta protein from phage λ. ICP8 significantly enhanced gene targeting rates in HEK 293T cells while Beta was not only unable to catalyze recombineering but inhibited gene targeting using endogenous recombination functions, despite both synaptases being well-expressed and localized to the nucleus. This proof of concept encourages developing species-specific SynExo recombinases for genome engineering.
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spelling pubmed-60936412018-08-30 Herpes ICP8 protein stimulates homologous recombination in human cells Valledor, Melvys Myers, Richard S. Schiller, Paul C. PLoS One Research Article Recombineering has transformed functional genomic analysis. Genome modification by recombineering using the phage lambda Red homologous recombination protein Beta in Escherichia coli has approached 100% efficiency. While highly efficient in E. coli, recombineering using the Red Synaptase/Exonuclease pair (SynExo) in other organisms declines in efficiency roughly correlating with phylogenetic distance from E. coli. SynExo recombinases are common to double-stranded DNA viruses infecting a variety of organisms, including humans. Human Herpes virus 1 (HHV1) encodes a SynExo comprised of ICP8 synaptase and UL12 exonuclease. In a previous study, the Herpes SynExo was reconstituted in vitro and shown to catalyze a model recombination reaction. Here we describe stimulation of gene targeting to edit a novel fluorescent protein gene in the human genome using ICP8 and compared its efficiency to that of a “humanized” version of Beta protein from phage λ. ICP8 significantly enhanced gene targeting rates in HEK 293T cells while Beta was not only unable to catalyze recombineering but inhibited gene targeting using endogenous recombination functions, despite both synaptases being well-expressed and localized to the nucleus. This proof of concept encourages developing species-specific SynExo recombinases for genome engineering. Public Library of Science 2018-08-15 /pmc/articles/PMC6093641/ /pubmed/30110337 http://dx.doi.org/10.1371/journal.pone.0200955 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Valledor, Melvys
Myers, Richard S.
Schiller, Paul C.
Herpes ICP8 protein stimulates homologous recombination in human cells
title Herpes ICP8 protein stimulates homologous recombination in human cells
title_full Herpes ICP8 protein stimulates homologous recombination in human cells
title_fullStr Herpes ICP8 protein stimulates homologous recombination in human cells
title_full_unstemmed Herpes ICP8 protein stimulates homologous recombination in human cells
title_short Herpes ICP8 protein stimulates homologous recombination in human cells
title_sort herpes icp8 protein stimulates homologous recombination in human cells
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6093641/
https://www.ncbi.nlm.nih.gov/pubmed/30110337
http://dx.doi.org/10.1371/journal.pone.0200955
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