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The blessing of Dimensionality: Feature Selection outperforms functional connectivity-based feature transformation to classify ADHD subjects from EEG patterns of phase synchronisation

Functional connectivity (FC) characterizes brain activity from a multivariate set of N brain signals by means of an NxN matrix A, whose elements estimate the dependence within each possible pair of signals. Such matrix can be used as a feature vector for (un)supervised subject classification. Yet if...

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Autores principales: Pereda, Ernesto, García-Torres, Miguel, Melián-Batista, Belén, Mañas, Soledad, Méndez, Leopoldo, González, Julián J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6095525/
https://www.ncbi.nlm.nih.gov/pubmed/30114248
http://dx.doi.org/10.1371/journal.pone.0201660
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author Pereda, Ernesto
García-Torres, Miguel
Melián-Batista, Belén
Mañas, Soledad
Méndez, Leopoldo
González, Julián J.
author_facet Pereda, Ernesto
García-Torres, Miguel
Melián-Batista, Belén
Mañas, Soledad
Méndez, Leopoldo
González, Julián J.
author_sort Pereda, Ernesto
collection PubMed
description Functional connectivity (FC) characterizes brain activity from a multivariate set of N brain signals by means of an NxN matrix A, whose elements estimate the dependence within each possible pair of signals. Such matrix can be used as a feature vector for (un)supervised subject classification. Yet if N is large, A is highly dimensional. Little is known on the effect that different strategies to reduce its dimensionality may have on its classification ability. Here, we apply different machine learning algorithms to classify 33 children (age [6-14 years]) into two groups (healthy controls and Attention Deficit Hyperactivity Disorder patients) using EEG FC patterns obtained from two phase synchronisation indices. We found that the classification is highly successful (around 95%) if the whole matrix A is taken into account, and the relevant features are selected using machine learning methods. However, if FC algorithms are applied instead to transform A into a lower dimensionality matrix, the classification rate drops to less than 80%. We conclude that, for the purpose of pattern classification, the relevant features should be selected among the elements of A by using appropriate machine learning algorithms.
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spelling pubmed-60955252018-08-30 The blessing of Dimensionality: Feature Selection outperforms functional connectivity-based feature transformation to classify ADHD subjects from EEG patterns of phase synchronisation Pereda, Ernesto García-Torres, Miguel Melián-Batista, Belén Mañas, Soledad Méndez, Leopoldo González, Julián J. PLoS One Research Article Functional connectivity (FC) characterizes brain activity from a multivariate set of N brain signals by means of an NxN matrix A, whose elements estimate the dependence within each possible pair of signals. Such matrix can be used as a feature vector for (un)supervised subject classification. Yet if N is large, A is highly dimensional. Little is known on the effect that different strategies to reduce its dimensionality may have on its classification ability. Here, we apply different machine learning algorithms to classify 33 children (age [6-14 years]) into two groups (healthy controls and Attention Deficit Hyperactivity Disorder patients) using EEG FC patterns obtained from two phase synchronisation indices. We found that the classification is highly successful (around 95%) if the whole matrix A is taken into account, and the relevant features are selected using machine learning methods. However, if FC algorithms are applied instead to transform A into a lower dimensionality matrix, the classification rate drops to less than 80%. We conclude that, for the purpose of pattern classification, the relevant features should be selected among the elements of A by using appropriate machine learning algorithms. Public Library of Science 2018-08-16 /pmc/articles/PMC6095525/ /pubmed/30114248 http://dx.doi.org/10.1371/journal.pone.0201660 Text en © 2018 Pereda et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Pereda, Ernesto
García-Torres, Miguel
Melián-Batista, Belén
Mañas, Soledad
Méndez, Leopoldo
González, Julián J.
The blessing of Dimensionality: Feature Selection outperforms functional connectivity-based feature transformation to classify ADHD subjects from EEG patterns of phase synchronisation
title The blessing of Dimensionality: Feature Selection outperforms functional connectivity-based feature transformation to classify ADHD subjects from EEG patterns of phase synchronisation
title_full The blessing of Dimensionality: Feature Selection outperforms functional connectivity-based feature transformation to classify ADHD subjects from EEG patterns of phase synchronisation
title_fullStr The blessing of Dimensionality: Feature Selection outperforms functional connectivity-based feature transformation to classify ADHD subjects from EEG patterns of phase synchronisation
title_full_unstemmed The blessing of Dimensionality: Feature Selection outperforms functional connectivity-based feature transformation to classify ADHD subjects from EEG patterns of phase synchronisation
title_short The blessing of Dimensionality: Feature Selection outperforms functional connectivity-based feature transformation to classify ADHD subjects from EEG patterns of phase synchronisation
title_sort blessing of dimensionality: feature selection outperforms functional connectivity-based feature transformation to classify adhd subjects from eeg patterns of phase synchronisation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6095525/
https://www.ncbi.nlm.nih.gov/pubmed/30114248
http://dx.doi.org/10.1371/journal.pone.0201660
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