Cargando…
Digital open science—Teaching digital tools for reproducible and transparent research
An important hallmark of science is the transparency and reproducibility of scientific results. Over the last few years, internet-based technologies have emerged that allow for a representation of the scientific process that goes far beyond traditional methods and analysis descriptions. Using these...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6095603/ https://www.ncbi.nlm.nih.gov/pubmed/30048447 http://dx.doi.org/10.1371/journal.pbio.2006022 |
_version_ | 1783347969510080512 |
---|---|
author | Toelch, Ulf Ostwald, Dirk |
author_facet | Toelch, Ulf Ostwald, Dirk |
author_sort | Toelch, Ulf |
collection | PubMed |
description | An important hallmark of science is the transparency and reproducibility of scientific results. Over the last few years, internet-based technologies have emerged that allow for a representation of the scientific process that goes far beyond traditional methods and analysis descriptions. Using these often freely available tools requires a suite of skills that is not necessarily part of a curriculum in the life sciences. However, funders, journals, and policy makers increasingly require researchers to ensure complete reproducibility of their methods and analyses. To close this gap, we designed an introductory course that guides students towards a reproducible science workflow. Here, we outline the course content and possible extensions, report encountered challenges, and discuss how to integrate such a course in existing curricula. |
format | Online Article Text |
id | pubmed-6095603 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-60956032018-08-30 Digital open science—Teaching digital tools for reproducible and transparent research Toelch, Ulf Ostwald, Dirk PLoS Biol Community Page An important hallmark of science is the transparency and reproducibility of scientific results. Over the last few years, internet-based technologies have emerged that allow for a representation of the scientific process that goes far beyond traditional methods and analysis descriptions. Using these often freely available tools requires a suite of skills that is not necessarily part of a curriculum in the life sciences. However, funders, journals, and policy makers increasingly require researchers to ensure complete reproducibility of their methods and analyses. To close this gap, we designed an introductory course that guides students towards a reproducible science workflow. Here, we outline the course content and possible extensions, report encountered challenges, and discuss how to integrate such a course in existing curricula. Public Library of Science 2018-07-26 /pmc/articles/PMC6095603/ /pubmed/30048447 http://dx.doi.org/10.1371/journal.pbio.2006022 Text en © 2018 Toelch, Ostwald http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Community Page Toelch, Ulf Ostwald, Dirk Digital open science—Teaching digital tools for reproducible and transparent research |
title | Digital open science—Teaching digital tools for reproducible and transparent research |
title_full | Digital open science—Teaching digital tools for reproducible and transparent research |
title_fullStr | Digital open science—Teaching digital tools for reproducible and transparent research |
title_full_unstemmed | Digital open science—Teaching digital tools for reproducible and transparent research |
title_short | Digital open science—Teaching digital tools for reproducible and transparent research |
title_sort | digital open science—teaching digital tools for reproducible and transparent research |
topic | Community Page |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6095603/ https://www.ncbi.nlm.nih.gov/pubmed/30048447 http://dx.doi.org/10.1371/journal.pbio.2006022 |
work_keys_str_mv | AT toelchulf digitalopenscienceteachingdigitaltoolsforreproducibleandtransparentresearch AT ostwalddirk digitalopenscienceteachingdigitaltoolsforreproducibleandtransparentresearch |