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Machine Learning Adaptive Basis Sets for Efficient Large Scale Density Functional Theory Simulation
[Image: see text] It is chemically intuitive that an optimal atom centered basis set must adapt to its atomic environment, for example by polarizing toward nearby atoms. Adaptive basis sets of small size can be significantly more accurate than traditional atom centered basis sets of the same size. T...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical Society
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6096449/ https://www.ncbi.nlm.nih.gov/pubmed/29957943 http://dx.doi.org/10.1021/acs.jctc.8b00378 |
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author | Schütt, Ole VandeVondele, Joost |
author_facet | Schütt, Ole VandeVondele, Joost |
author_sort | Schütt, Ole |
collection | PubMed |
description | [Image: see text] It is chemically intuitive that an optimal atom centered basis set must adapt to its atomic environment, for example by polarizing toward nearby atoms. Adaptive basis sets of small size can be significantly more accurate than traditional atom centered basis sets of the same size. The small size and well conditioned nature of these basis sets leads to large saving in computational cost, in particular in a linear scaling framework. Here, it is shown that machine learning can be used to predict such adaptive basis sets using local geometrical information only. As a result, various properties of standard DFT calculations can be easily obtained at much lower costs, including nuclear gradients. In our approach, a rotationally invariant parametrization of the basis is obtained by employing a potential anchored on neighboring atoms to ultimately construct a rotation matrix that turns a traditional atom centered basis set into a suitable adaptive basis set. The method is demonstrated using MD simulations of liquid water, where it is shown that minimal basis sets yield structural properties in fair agreement with basis set converged results, while reducing the computational cost in the best case by a factor of 200 and the required flops by 4 orders of magnitude. Already a very small training set yields satisfactory results as the variational nature of the method provides robustness. |
format | Online Article Text |
id | pubmed-6096449 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | American
Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-60964492018-08-20 Machine Learning Adaptive Basis Sets for Efficient Large Scale Density Functional Theory Simulation Schütt, Ole VandeVondele, Joost J Chem Theory Comput [Image: see text] It is chemically intuitive that an optimal atom centered basis set must adapt to its atomic environment, for example by polarizing toward nearby atoms. Adaptive basis sets of small size can be significantly more accurate than traditional atom centered basis sets of the same size. The small size and well conditioned nature of these basis sets leads to large saving in computational cost, in particular in a linear scaling framework. Here, it is shown that machine learning can be used to predict such adaptive basis sets using local geometrical information only. As a result, various properties of standard DFT calculations can be easily obtained at much lower costs, including nuclear gradients. In our approach, a rotationally invariant parametrization of the basis is obtained by employing a potential anchored on neighboring atoms to ultimately construct a rotation matrix that turns a traditional atom centered basis set into a suitable adaptive basis set. The method is demonstrated using MD simulations of liquid water, where it is shown that minimal basis sets yield structural properties in fair agreement with basis set converged results, while reducing the computational cost in the best case by a factor of 200 and the required flops by 4 orders of magnitude. Already a very small training set yields satisfactory results as the variational nature of the method provides robustness. American Chemical Society 2018-06-29 2018-08-14 /pmc/articles/PMC6096449/ /pubmed/29957943 http://dx.doi.org/10.1021/acs.jctc.8b00378 Text en Copyright © 2018 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Schütt, Ole VandeVondele, Joost Machine Learning Adaptive Basis Sets for Efficient Large Scale Density Functional Theory Simulation |
title | Machine Learning Adaptive Basis Sets for Efficient
Large Scale Density Functional Theory Simulation |
title_full | Machine Learning Adaptive Basis Sets for Efficient
Large Scale Density Functional Theory Simulation |
title_fullStr | Machine Learning Adaptive Basis Sets for Efficient
Large Scale Density Functional Theory Simulation |
title_full_unstemmed | Machine Learning Adaptive Basis Sets for Efficient
Large Scale Density Functional Theory Simulation |
title_short | Machine Learning Adaptive Basis Sets for Efficient
Large Scale Density Functional Theory Simulation |
title_sort | machine learning adaptive basis sets for efficient
large scale density functional theory simulation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6096449/ https://www.ncbi.nlm.nih.gov/pubmed/29957943 http://dx.doi.org/10.1021/acs.jctc.8b00378 |
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