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Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data
The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome sequence produced by the International Wheat Genome Sequencing Consortium. Genome browsers, BLAST, and InterMine tools have been established for...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6097284/ https://www.ncbi.nlm.nih.gov/pubmed/30115101 http://dx.doi.org/10.1186/s13059-018-1491-4 |
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author | Alaux, Michael Rogers, Jane Letellier, Thomas Flores, Raphaël Alfama, Françoise Pommier, Cyril Mohellibi, Nacer Durand, Sophie Kimmel, Erik Michotey, Célia Guerche, Claire Loaec, Mikaël Lainé, Mathilde Steinbach, Delphine Choulet, Frédéric Rimbert, Hélène Leroy, Philippe Guilhot, Nicolas Salse, Jérôme Feuillet, Catherine Paux, Etienne Eversole, Kellye Adam-Blondon, Anne-Françoise Quesneville, Hadi |
author_facet | Alaux, Michael Rogers, Jane Letellier, Thomas Flores, Raphaël Alfama, Françoise Pommier, Cyril Mohellibi, Nacer Durand, Sophie Kimmel, Erik Michotey, Célia Guerche, Claire Loaec, Mikaël Lainé, Mathilde Steinbach, Delphine Choulet, Frédéric Rimbert, Hélène Leroy, Philippe Guilhot, Nicolas Salse, Jérôme Feuillet, Catherine Paux, Etienne Eversole, Kellye Adam-Blondon, Anne-Françoise Quesneville, Hadi |
author_sort | Alaux, Michael |
collection | PubMed |
description | The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome sequence produced by the International Wheat Genome Sequencing Consortium. Genome browsers, BLAST, and InterMine tools have been established for in-depth exploration of the genome sequence together with additional linked datasets including physical maps, sequence variations, gene expression, and genetic and phenomic data from other international collaborative projects already stored in the GnpIS information system. The portal provides enhanced search and browser features that will facilitate the deployment of the latest genomics resources in wheat improvement. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13059-018-1491-4) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6097284 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-60972842018-08-20 Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data Alaux, Michael Rogers, Jane Letellier, Thomas Flores, Raphaël Alfama, Françoise Pommier, Cyril Mohellibi, Nacer Durand, Sophie Kimmel, Erik Michotey, Célia Guerche, Claire Loaec, Mikaël Lainé, Mathilde Steinbach, Delphine Choulet, Frédéric Rimbert, Hélène Leroy, Philippe Guilhot, Nicolas Salse, Jérôme Feuillet, Catherine Paux, Etienne Eversole, Kellye Adam-Blondon, Anne-Françoise Quesneville, Hadi Genome Biol Database The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome sequence produced by the International Wheat Genome Sequencing Consortium. Genome browsers, BLAST, and InterMine tools have been established for in-depth exploration of the genome sequence together with additional linked datasets including physical maps, sequence variations, gene expression, and genetic and phenomic data from other international collaborative projects already stored in the GnpIS information system. The portal provides enhanced search and browser features that will facilitate the deployment of the latest genomics resources in wheat improvement. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13059-018-1491-4) contains supplementary material, which is available to authorized users. BioMed Central 2018-08-17 /pmc/articles/PMC6097284/ /pubmed/30115101 http://dx.doi.org/10.1186/s13059-018-1491-4 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Database Alaux, Michael Rogers, Jane Letellier, Thomas Flores, Raphaël Alfama, Françoise Pommier, Cyril Mohellibi, Nacer Durand, Sophie Kimmel, Erik Michotey, Célia Guerche, Claire Loaec, Mikaël Lainé, Mathilde Steinbach, Delphine Choulet, Frédéric Rimbert, Hélène Leroy, Philippe Guilhot, Nicolas Salse, Jérôme Feuillet, Catherine Paux, Etienne Eversole, Kellye Adam-Blondon, Anne-Françoise Quesneville, Hadi Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data |
title | Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data |
title_full | Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data |
title_fullStr | Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data |
title_full_unstemmed | Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data |
title_short | Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data |
title_sort | linking the international wheat genome sequencing consortium bread wheat reference genome sequence to wheat genetic and phenomic data |
topic | Database |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6097284/ https://www.ncbi.nlm.nih.gov/pubmed/30115101 http://dx.doi.org/10.1186/s13059-018-1491-4 |
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