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Predicting electronic structure properties of transition metal complexes with neural networks
High-throughput computational screening has emerged as a critical component of materials discovery. Direct density functional theory (DFT) simulation of inorganic materials and molecular transition metal complexes is often used to describe subtle trends in inorganic bonding and spin-state ordering,...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6100542/ https://www.ncbi.nlm.nih.gov/pubmed/30155224 http://dx.doi.org/10.1039/c7sc01247k |
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author | Janet, Jon Paul Kulik, Heather J. |
author_facet | Janet, Jon Paul Kulik, Heather J. |
author_sort | Janet, Jon Paul |
collection | PubMed |
description | High-throughput computational screening has emerged as a critical component of materials discovery. Direct density functional theory (DFT) simulation of inorganic materials and molecular transition metal complexes is often used to describe subtle trends in inorganic bonding and spin-state ordering, but these calculations are computationally costly and properties are sensitive to the exchange–correlation functional employed. To begin to overcome these challenges, we trained artificial neural networks (ANNs) to predict quantum-mechanically-derived properties, including spin-state ordering, sensitivity to Hartree–Fock exchange, and spin-state specific bond lengths in transition metal complexes. Our ANN is trained on a small set of inorganic-chemistry-appropriate empirical inputs that are both maximally transferable and do not require precise three-dimensional structural information for prediction. Using these descriptors, our ANN predicts spin-state splittings of single-site transition metal complexes (i.e., Cr–Ni) at arbitrary amounts of Hartree–Fock exchange to within 3 kcal mol(–1) accuracy of DFT calculations. Our exchange-sensitivity ANN enables improved predictions on a diverse test set of experimentally-characterized transition metal complexes by extrapolation from semi-local DFT to hybrid DFT. The ANN also outperforms other machine learning models (i.e., support vector regression and kernel ridge regression), demonstrating particularly improved performance in transferability, as measured by prediction errors on the diverse test set. We establish the value of new uncertainty quantification tools to estimate ANN prediction uncertainty in computational chemistry, and we provide additional heuristics for identification of when a compound of interest is likely to be poorly predicted by the ANN. The ANNs developed in this work provide a strategy for screening transition metal complexes both with direct ANN prediction and with improved structure generation for validation with first principles simulation. |
format | Online Article Text |
id | pubmed-6100542 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-61005422018-08-28 Predicting electronic structure properties of transition metal complexes with neural networks Janet, Jon Paul Kulik, Heather J. Chem Sci Chemistry High-throughput computational screening has emerged as a critical component of materials discovery. Direct density functional theory (DFT) simulation of inorganic materials and molecular transition metal complexes is often used to describe subtle trends in inorganic bonding and spin-state ordering, but these calculations are computationally costly and properties are sensitive to the exchange–correlation functional employed. To begin to overcome these challenges, we trained artificial neural networks (ANNs) to predict quantum-mechanically-derived properties, including spin-state ordering, sensitivity to Hartree–Fock exchange, and spin-state specific bond lengths in transition metal complexes. Our ANN is trained on a small set of inorganic-chemistry-appropriate empirical inputs that are both maximally transferable and do not require precise three-dimensional structural information for prediction. Using these descriptors, our ANN predicts spin-state splittings of single-site transition metal complexes (i.e., Cr–Ni) at arbitrary amounts of Hartree–Fock exchange to within 3 kcal mol(–1) accuracy of DFT calculations. Our exchange-sensitivity ANN enables improved predictions on a diverse test set of experimentally-characterized transition metal complexes by extrapolation from semi-local DFT to hybrid DFT. The ANN also outperforms other machine learning models (i.e., support vector regression and kernel ridge regression), demonstrating particularly improved performance in transferability, as measured by prediction errors on the diverse test set. We establish the value of new uncertainty quantification tools to estimate ANN prediction uncertainty in computational chemistry, and we provide additional heuristics for identification of when a compound of interest is likely to be poorly predicted by the ANN. The ANNs developed in this work provide a strategy for screening transition metal complexes both with direct ANN prediction and with improved structure generation for validation with first principles simulation. Royal Society of Chemistry 2017-07-01 2017-05-17 /pmc/articles/PMC6100542/ /pubmed/30155224 http://dx.doi.org/10.1039/c7sc01247k Text en This journal is © The Royal Society of Chemistry 2017 http://creativecommons.org/licenses/by/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution 3.0 Unported Licence (CC BY 3.0) |
spellingShingle | Chemistry Janet, Jon Paul Kulik, Heather J. Predicting electronic structure properties of transition metal complexes with neural networks |
title | Predicting electronic structure properties of transition metal complexes with neural networks
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title_full | Predicting electronic structure properties of transition metal complexes with neural networks
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title_fullStr | Predicting electronic structure properties of transition metal complexes with neural networks
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title_full_unstemmed | Predicting electronic structure properties of transition metal complexes with neural networks
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title_short | Predicting electronic structure properties of transition metal complexes with neural networks
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title_sort | predicting electronic structure properties of transition metal complexes with neural networks |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6100542/ https://www.ncbi.nlm.nih.gov/pubmed/30155224 http://dx.doi.org/10.1039/c7sc01247k |
work_keys_str_mv | AT janetjonpaul predictingelectronicstructurepropertiesoftransitionmetalcomplexeswithneuralnetworks AT kulikheatherj predictingelectronicstructurepropertiesoftransitionmetalcomplexeswithneuralnetworks |