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Big data analysis for evaluating bioinvasion risk

BACKGROUND: Global maritime trade plays an important role in the modern transportation industry. It brings significant economic profit along with bioinvasion risk. Species translocate and establish in a non-native area through ballast water and biofouling. Aiming at aquatic bioinvasion issue, people...

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Autores principales: Wang, Shengling, Wang, Chenyu, Wang, Shenling, Ma, Liran
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6101070/
https://www.ncbi.nlm.nih.gov/pubmed/30367580
http://dx.doi.org/10.1186/s12859-018-2272-5
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author Wang, Shengling
Wang, Chenyu
Wang, Shenling
Ma, Liran
author_facet Wang, Shengling
Wang, Chenyu
Wang, Shenling
Ma, Liran
author_sort Wang, Shengling
collection PubMed
description BACKGROUND: Global maritime trade plays an important role in the modern transportation industry. It brings significant economic profit along with bioinvasion risk. Species translocate and establish in a non-native area through ballast water and biofouling. Aiming at aquatic bioinvasion issue, people proposed various suggestions for bioinvasion management. Nonetheless, these suggestions only focus on the chance of a port been affected but ignore the port’s ability to further spread the invaded species. RESULTS: To tackle the issues of the existing work, we propose a biosecurity triggering mechanism, where the bioinvasion risk of a port is estimated according to both the invaded risk of a port and its power of being a stepping-stone. To compute the invaded risk, we utilize the automatic identification system data, the ballast water data and marine environmental data. According to the invaded risk of ports, we construct a species invasion network (SIN). The incoming bioinvasion risk is derived from invaded risk data while the invasion risk spreading capability of each port is evaluated by s-core decomposition of SIN. CONCLUSIONS: We illustrate 100 ports in the world that have the highest bioinvasion risk when the invaded risk and stepping-stone bioinvasion risk are equally treated. There are two bioinvasion risk intensive regions, namely the Western Europe (including the Western European margin and the Mediterranean) and the Asia-Pacific, which are just the region with a high growth rate of non-indigenous species and the area that has been identified as a source for many of non-indigenous species discovered elsewhere (especially the Asian clam, which is assumed to be the most invasive species worldwide).
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spelling pubmed-61010702018-08-27 Big data analysis for evaluating bioinvasion risk Wang, Shengling Wang, Chenyu Wang, Shenling Ma, Liran BMC Bioinformatics Research BACKGROUND: Global maritime trade plays an important role in the modern transportation industry. It brings significant economic profit along with bioinvasion risk. Species translocate and establish in a non-native area through ballast water and biofouling. Aiming at aquatic bioinvasion issue, people proposed various suggestions for bioinvasion management. Nonetheless, these suggestions only focus on the chance of a port been affected but ignore the port’s ability to further spread the invaded species. RESULTS: To tackle the issues of the existing work, we propose a biosecurity triggering mechanism, where the bioinvasion risk of a port is estimated according to both the invaded risk of a port and its power of being a stepping-stone. To compute the invaded risk, we utilize the automatic identification system data, the ballast water data and marine environmental data. According to the invaded risk of ports, we construct a species invasion network (SIN). The incoming bioinvasion risk is derived from invaded risk data while the invasion risk spreading capability of each port is evaluated by s-core decomposition of SIN. CONCLUSIONS: We illustrate 100 ports in the world that have the highest bioinvasion risk when the invaded risk and stepping-stone bioinvasion risk are equally treated. There are two bioinvasion risk intensive regions, namely the Western Europe (including the Western European margin and the Mediterranean) and the Asia-Pacific, which are just the region with a high growth rate of non-indigenous species and the area that has been identified as a source for many of non-indigenous species discovered elsewhere (especially the Asian clam, which is assumed to be the most invasive species worldwide). BioMed Central 2018-08-13 /pmc/articles/PMC6101070/ /pubmed/30367580 http://dx.doi.org/10.1186/s12859-018-2272-5 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Wang, Shengling
Wang, Chenyu
Wang, Shenling
Ma, Liran
Big data analysis for evaluating bioinvasion risk
title Big data analysis for evaluating bioinvasion risk
title_full Big data analysis for evaluating bioinvasion risk
title_fullStr Big data analysis for evaluating bioinvasion risk
title_full_unstemmed Big data analysis for evaluating bioinvasion risk
title_short Big data analysis for evaluating bioinvasion risk
title_sort big data analysis for evaluating bioinvasion risk
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6101070/
https://www.ncbi.nlm.nih.gov/pubmed/30367580
http://dx.doi.org/10.1186/s12859-018-2272-5
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