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Prediction of Pseudoprogression versus Progression using Machine Learning Algorithm in Glioblastoma
We aimed to investigate the feasibility of machine learning (ML) algorithm to distinguish pseudoprogression (PsPD) from progression (PD) in patients with glioblastoma (GBM). We recruited the patients diagnosed as primary GBM who received gross total resection (GTR) and concurrent chemoradiotherapy i...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6104063/ https://www.ncbi.nlm.nih.gov/pubmed/30131513 http://dx.doi.org/10.1038/s41598-018-31007-2 |
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author | Jang, Bum-Sup Jeon, Seung Hyuck Kim, Il Han Kim, In Ah |
author_facet | Jang, Bum-Sup Jeon, Seung Hyuck Kim, Il Han Kim, In Ah |
author_sort | Jang, Bum-Sup |
collection | PubMed |
description | We aimed to investigate the feasibility of machine learning (ML) algorithm to distinguish pseudoprogression (PsPD) from progression (PD) in patients with glioblastoma (GBM). We recruited the patients diagnosed as primary GBM who received gross total resection (GTR) and concurrent chemoradiotherapy in two institutions from April 2010 to April 2017 and presented suspicious contrast-enhanced lesion on brain magnetic resonance imaging (MRI) during follow-up. Patients from two institutions were allocated to training (N = 59) and testing (N = 19) datasets, respectively. We developed a convolutional neural network combined with a long short-term memory ML structure. MRI data, which was 9 axial post-contrast T1-weighted images in our study, and clinical features were incorporated (Model 1). In the testing set, the trained Model 1 resulted in AUC of 0.83, AUPRC of 0.87, and F1-score of 0.74 using optimal threshold. The performance was superior to that of Model 2 (CNN-LSTM model with MRI data alone) and Model 3 (random forest model with clinical feature alone). The developed algorithm involving MRI data and clinical features could help making decision during follow-up of patients with GBM treated with GTR and concurrent CCRT. |
format | Online Article Text |
id | pubmed-6104063 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-61040632018-08-27 Prediction of Pseudoprogression versus Progression using Machine Learning Algorithm in Glioblastoma Jang, Bum-Sup Jeon, Seung Hyuck Kim, Il Han Kim, In Ah Sci Rep Article We aimed to investigate the feasibility of machine learning (ML) algorithm to distinguish pseudoprogression (PsPD) from progression (PD) in patients with glioblastoma (GBM). We recruited the patients diagnosed as primary GBM who received gross total resection (GTR) and concurrent chemoradiotherapy in two institutions from April 2010 to April 2017 and presented suspicious contrast-enhanced lesion on brain magnetic resonance imaging (MRI) during follow-up. Patients from two institutions were allocated to training (N = 59) and testing (N = 19) datasets, respectively. We developed a convolutional neural network combined with a long short-term memory ML structure. MRI data, which was 9 axial post-contrast T1-weighted images in our study, and clinical features were incorporated (Model 1). In the testing set, the trained Model 1 resulted in AUC of 0.83, AUPRC of 0.87, and F1-score of 0.74 using optimal threshold. The performance was superior to that of Model 2 (CNN-LSTM model with MRI data alone) and Model 3 (random forest model with clinical feature alone). The developed algorithm involving MRI data and clinical features could help making decision during follow-up of patients with GBM treated with GTR and concurrent CCRT. Nature Publishing Group UK 2018-08-21 /pmc/articles/PMC6104063/ /pubmed/30131513 http://dx.doi.org/10.1038/s41598-018-31007-2 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Jang, Bum-Sup Jeon, Seung Hyuck Kim, Il Han Kim, In Ah Prediction of Pseudoprogression versus Progression using Machine Learning Algorithm in Glioblastoma |
title | Prediction of Pseudoprogression versus Progression using Machine Learning Algorithm in Glioblastoma |
title_full | Prediction of Pseudoprogression versus Progression using Machine Learning Algorithm in Glioblastoma |
title_fullStr | Prediction of Pseudoprogression versus Progression using Machine Learning Algorithm in Glioblastoma |
title_full_unstemmed | Prediction of Pseudoprogression versus Progression using Machine Learning Algorithm in Glioblastoma |
title_short | Prediction of Pseudoprogression versus Progression using Machine Learning Algorithm in Glioblastoma |
title_sort | prediction of pseudoprogression versus progression using machine learning algorithm in glioblastoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6104063/ https://www.ncbi.nlm.nih.gov/pubmed/30131513 http://dx.doi.org/10.1038/s41598-018-31007-2 |
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