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Sparse Ordinal Logistic Regression and Its Application to Brain Decoding
Brain decoding with multivariate classification and regression has provided a powerful framework for characterizing information encoded in population neural activity. Classification and regression models are respectively used to predict discrete and continuous variables of interest. However, cogniti...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6104194/ https://www.ncbi.nlm.nih.gov/pubmed/30158864 http://dx.doi.org/10.3389/fninf.2018.00051 |
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author | Satake, Emi Majima, Kei Aoki, Shuntaro C. Kamitani, Yukiyasu |
author_facet | Satake, Emi Majima, Kei Aoki, Shuntaro C. Kamitani, Yukiyasu |
author_sort | Satake, Emi |
collection | PubMed |
description | Brain decoding with multivariate classification and regression has provided a powerful framework for characterizing information encoded in population neural activity. Classification and regression models are respectively used to predict discrete and continuous variables of interest. However, cognitive and behavioral parameters that we wish to decode are often ordinal variables whose values are discrete but ordered, such as subjective ratings. To date, there is no established method of predicting ordinal variables in brain decoding. In this study, we present a new algorithm, sparse ordinal logistic regression (SOLR), that combines ordinal logistic regression with Bayesian sparse weight estimation. We found that, in both simulation and analyses using real functional magnetic resonance imaging (fMRI) data, SOLR outperformed ordinal logistic regression with non-sparse regularization, indicating that sparseness leads to better decoding performance. SOLR also outperformed classification and linear regression models with the same type of sparseness, indicating the advantage of the modeling tailored to ordinal outputs. Our results suggest that SOLR provides a principled and effective method of decoding ordinal variables. |
format | Online Article Text |
id | pubmed-6104194 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-61041942018-08-29 Sparse Ordinal Logistic Regression and Its Application to Brain Decoding Satake, Emi Majima, Kei Aoki, Shuntaro C. Kamitani, Yukiyasu Front Neuroinform Neuroscience Brain decoding with multivariate classification and regression has provided a powerful framework for characterizing information encoded in population neural activity. Classification and regression models are respectively used to predict discrete and continuous variables of interest. However, cognitive and behavioral parameters that we wish to decode are often ordinal variables whose values are discrete but ordered, such as subjective ratings. To date, there is no established method of predicting ordinal variables in brain decoding. In this study, we present a new algorithm, sparse ordinal logistic regression (SOLR), that combines ordinal logistic regression with Bayesian sparse weight estimation. We found that, in both simulation and analyses using real functional magnetic resonance imaging (fMRI) data, SOLR outperformed ordinal logistic regression with non-sparse regularization, indicating that sparseness leads to better decoding performance. SOLR also outperformed classification and linear regression models with the same type of sparseness, indicating the advantage of the modeling tailored to ordinal outputs. Our results suggest that SOLR provides a principled and effective method of decoding ordinal variables. Frontiers Media S.A. 2018-08-15 /pmc/articles/PMC6104194/ /pubmed/30158864 http://dx.doi.org/10.3389/fninf.2018.00051 Text en Copyright © 2018 Satake, Majima, Aoki and Kamitani. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Satake, Emi Majima, Kei Aoki, Shuntaro C. Kamitani, Yukiyasu Sparse Ordinal Logistic Regression and Its Application to Brain Decoding |
title | Sparse Ordinal Logistic Regression and Its Application to Brain Decoding |
title_full | Sparse Ordinal Logistic Regression and Its Application to Brain Decoding |
title_fullStr | Sparse Ordinal Logistic Regression and Its Application to Brain Decoding |
title_full_unstemmed | Sparse Ordinal Logistic Regression and Its Application to Brain Decoding |
title_short | Sparse Ordinal Logistic Regression and Its Application to Brain Decoding |
title_sort | sparse ordinal logistic regression and its application to brain decoding |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6104194/ https://www.ncbi.nlm.nih.gov/pubmed/30158864 http://dx.doi.org/10.3389/fninf.2018.00051 |
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