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Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes
OBJECTIVES: Bacillus species, belonging to the family Bacillaceae, are rod-shaped aerobic or facultative anaerobic Gram-positive bacteria that can be isolated from various environmental niches. Bacillus pumilus strains are resistant to unfavorable conditions such as UV, H(2)O(2) and chemical disinfe...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6106879/ https://www.ncbi.nlm.nih.gov/pubmed/30134972 http://dx.doi.org/10.1186/s13104-018-3710-1 |
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author | Ziganshina, Elvira E. Mohammed, Waleed S. Shagimardanova, Elena I. Shigapova, Leyla H. Ziganshin, Ayrat M. |
author_facet | Ziganshina, Elvira E. Mohammed, Waleed S. Shagimardanova, Elena I. Shigapova, Leyla H. Ziganshin, Ayrat M. |
author_sort | Ziganshina, Elvira E. |
collection | PubMed |
description | OBJECTIVES: Bacillus species, belonging to the family Bacillaceae, are rod-shaped aerobic or facultative anaerobic Gram-positive bacteria that can be isolated from various environmental niches. Bacillus pumilus strains are resistant to unfavorable conditions such as UV, H(2)O(2) and chemical disinfection. Furthermore, B. pumilus strains synthesize multifarious important enzymes and can be used in the production of some fermented foods, bioremediation of wastewater systems and biodegradation of environmental contaminants. Hence, investigation at the genomic level is required to understand their ecology, genetics and potential applications. DATA DESCRIPTION: In this research, we provide the genomic insights into one Bacillus species (EZ-C07) isolated from digested agricultural waste materials. The draft genome of the strain EZ-C07 consists of 3,724,869 bp with 3890 coding sequences and 41.5% G + C content. Based on 16S rRNA gene sequence analysis followed by in silico DNA–DNA hybridization studies, the strain EZ-C07 was identified as Bacillus pumilus belonging to the family Bacillaceae within the phylum Firmicutes. The whole genome shotgun project of B. pumilus strain EZ-C07 can be accessed at DDBJ/ENA/GenBank under the Accession QLVI00000000. |
format | Online Article Text |
id | pubmed-6106879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-61068792018-08-29 Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes Ziganshina, Elvira E. Mohammed, Waleed S. Shagimardanova, Elena I. Shigapova, Leyla H. Ziganshin, Ayrat M. BMC Res Notes Data Note OBJECTIVES: Bacillus species, belonging to the family Bacillaceae, are rod-shaped aerobic or facultative anaerobic Gram-positive bacteria that can be isolated from various environmental niches. Bacillus pumilus strains are resistant to unfavorable conditions such as UV, H(2)O(2) and chemical disinfection. Furthermore, B. pumilus strains synthesize multifarious important enzymes and can be used in the production of some fermented foods, bioremediation of wastewater systems and biodegradation of environmental contaminants. Hence, investigation at the genomic level is required to understand their ecology, genetics and potential applications. DATA DESCRIPTION: In this research, we provide the genomic insights into one Bacillus species (EZ-C07) isolated from digested agricultural waste materials. The draft genome of the strain EZ-C07 consists of 3,724,869 bp with 3890 coding sequences and 41.5% G + C content. Based on 16S rRNA gene sequence analysis followed by in silico DNA–DNA hybridization studies, the strain EZ-C07 was identified as Bacillus pumilus belonging to the family Bacillaceae within the phylum Firmicutes. The whole genome shotgun project of B. pumilus strain EZ-C07 can be accessed at DDBJ/ENA/GenBank under the Accession QLVI00000000. BioMed Central 2018-08-22 /pmc/articles/PMC6106879/ /pubmed/30134972 http://dx.doi.org/10.1186/s13104-018-3710-1 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Data Note Ziganshina, Elvira E. Mohammed, Waleed S. Shagimardanova, Elena I. Shigapova, Leyla H. Ziganshin, Ayrat M. Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title | Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_full | Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_fullStr | Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_full_unstemmed | Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_short | Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_sort | draft genome sequence of bacillus pumilus strain ez-c07 isolated from digested agricultural wastes |
topic | Data Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6106879/ https://www.ncbi.nlm.nih.gov/pubmed/30134972 http://dx.doi.org/10.1186/s13104-018-3710-1 |
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